Publications


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Heng Xu, Kaijun Wang, and Dawn E. Holmes.  2014.  Bioelectrochemical removal of carbon dioxide (CO2): an innovative method for biogas upgrading.  Bioresource Technology.  173:392-398. 

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Derek R. Lovley and Nikhil S. Malvankar.  2014.  Seeing is Believing: Novel Imaging Techniques Help Clarify Microbial Nanowire Structure and Function.  Environmental Microbiology.  DOI: 10.1111/1462-2920.12708. 

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Marta Estevez-Canales, Akiyoshi Kuzume, Zulema Borjas, Michael Füeg, Derek Lovley, Thomas Wandlowski and Abraham Esteve-Núñe.  2014.  A severe reduction in the Cytochrome C content of Geobacter sulfurreducens eliminates its capacity for extracellular electron transfer.  Environmental Microbiology Reports.  DOI: 10.1111/1758-2229.12230. 

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Toshiyuki Ueki, Kelly P. Nevin, Trevor L. Woodard, Derek R. Lovley.  2014.  Converting Carbon Dioxide to Butyrate with an Engineered Strain of Clostridium ljungdahlii.  mBio.  doi: 10.1128/mBio.01636-1.  

(mBio Editor's Pick Article)

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Nikhil S. Malvankar, Sibel Ebru Yalcin, Mark T. Tuominen, and Derek R. Lovley.  2014.  Visualization of charge propagation along individual pili proteins using ambient electrostatic force microscopy.  Nature Nanotechnology.  doi:10.1038/nnano.2014.236

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Roberto Orellana, Kim K. Hixson, Sean Murphy, Tünde Mester, Manju L. Sharma, Mary S. Lipton, and Derek R. Lovley.  2014.  Proteome of Geobacter sulfurreducens in the presence of U(VI).  Microbiology.  doi:10.1099/mic.0.081398-0

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Nadeera Jayasinghe, Ashley Franks, Kelly P. Nevin, and Radhakrishnan Mahadevan.  2014.  Metabolic Modelling of Spatial Heterogeneity of Biofilms in Microbial Fuel Cells Reveals Substrate Limitations in Electrical Current Generation.  Biotechnology Journal.  9:1350-1361. 

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Dawn E. Holmes, Ludovic Giloteaux, Roberto Orellana, Kenneth H. Williams, Mark J. Robbins and Derek R. Lovley.  2014.  Methane production from protozoan endosymbionts following stimulation of microbial metabolism within subsurface sediments.  Frontiers in Microbiology.  doi: 10.3389/fmicb.2014.00366. 

(Frontiers Top 10 most viewed Microbiology research articles in August 2014)

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Dawn E Holmes, Ludovic Giloteaux, Akhilesh K Chaurasia, Kenneth H Williams, Birgit Luef, Michael J Wilkins, Kelly C Wrighton, Courtney A Thompson, Luis R Comolli and Derek R Lovley.  2014.  Evidence of Geobacter-associated phage in a uranium-contaminated aquifer.  The ISME Journal.  doi:10.1038/ismej.2014.128

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Nikhil S Malvankar, Gary M King and Derek R Lovley.  2014.  Centimeter-long electron transport in marine sediments via conductive minerals.  The ISME Journal.  doi:10.1038/ismej.2014.131

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Jessica A. Smith, Pier-Luc Tremblay, Pravin Malla Shrestha, Oona L. Snoeyenbos-West, Ashley E. Franks, Kelly P. Nevin and Derek R. Lovley.  2014.  Going Wireless: Fe(III) Oxide Reduction without Pili by Geobacter sulfurreducens Strain JS-1.  Applied and Environmental Microbiology.  80:4331-4340.

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Nikhil S Malvankar and Derek R Lovley.  2014.  Microbial nanowires for bioenergy applications.  Current Opinion in Biotechnology.  27:88-95. 

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Tian Zhang, Pier-Luc Tremblay, Akhilesh K. Chaurasia, Jessica A. Smith, Timothy S. Bain, and Derek R. Lovley.  2014.  Identification of genes specifically required for the anaerobic metabolism of benzene in Geobacter metallireducens.  Frontiers in Microbiology.  5:245. doi:10.3389/fmicb.2014.00245.

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Shanshan Chen, Amelia-Elena Rotaru, Pravin Malla Shrestha, Nikhil S. Malvankar, Fanghua Liu, Wei Fan, Kelly P. Nevin, Derek R. Lovley.  2014.  Promoting Interspecies Electron Transfer with Biochar.  Scientific Reports.  4:5019. DOI: 10.1038/srep05019. 

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Amelia-Elena Rotaru, Pravin Malla Shrestha, Fanghua Liu, Beatrice Markovaite, Shanshan Chen, Kelly Nevin and Derek Lovley.  2014.  Direct Interspecies Electron Transfer Between Geobacter metallireducens and Methanosarcina barkeri.  Applied and Environmental Microbiology. 

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Adam M. Feist, Harish Nagarajan, Amelia-Elena Rotaru, Pier-Luc Tremblay, Tian Zhang, Kelly P. Nevin, Derek R. Lovley, and Karsten Zengler.  2014.  Constraint-Based Modeling of Carbon Fixation and the Energetics of Electron Transfer in Geobacter metallireducens.  PLOS Computational Biology.  DOI: 10.1371/journal.pcbi.1003575.

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Fanghua Liu, Amelia-Elena Rotaru, Pravin M. Shrestha, Nikhil S. Malvankar, Kelly P. Nevin and Derek R. Lovley.  2014.  Magnetite Compensates for the Lack of a Pilin-Associated c-Type Cytochrome in Extracellular Electron Exchange.  Environmental Microbiology.  DOI: 10.1111/1462-2920.12485

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Areen Banerjee, Ching Leang, Toshiyuki Ueki, Kelly P. Nevin and Derek R. Lovley.  2014.  A Lactose-Inducible System for Metabolic Engineering of Clostridium ljungdahlii.  Applied and Environmental Microbiology. 

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Mallory Embree, Yu Qiu, Wendy Shieu, Harish Nagarajan, Regina O'Neil, Derek Lovley and Karsten Zengler.  2014.  The Iron stimulon and Fur regulon of Geobacter sulfurreducens and their role in energy metabolism.  Applied and Environmental Microbiology.  80:2918-2927.

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Xing Liu, Pier-Luc Tremblay, Nikhil S. Malvankar, Kelly P. Nevin, Derek R. Lovley and Madeline Vargas.  2014.  Geobacter sulfurreducens Strain Expressing Pseudomonas aeruginosa Type IV Pili Localizes OmcS on Pili but is Deficient in Fe(III) Oxide Reduction and Current Production. 

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Tian Zhang, Timothy S. Bain, Melissa A. Barlett, Shabir A. Dar, Oona L. Snoeyenbos-West, Kelly P. Nevin and Derek R. Lovley.  2014.  Sulfur oxidation to sulfate coupled with electron transfer to electrodes by Desulfuromonas strain TZ1.  Microbiology.  16-:123-129

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Pravin Malla Shrestha, Amelia-Elena Rotaru, Muktak Aklujkar, Fanghua Liu, Minita Shrestha, Zarath M. Summers, Nikhil Malvankar, Dan Carlo Flores, Derek R Lovley.  2013.  Syntrophic Growth with Direct Interspecies Electron Transfer as the Primary Mechanism for Energy Exchange.  Environmental Microbiology Reports.  5:904-910.

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Harish Nagarajan, Merve Sahin, Juan Nogales, Haythem Latif, Derek R. Lovley, Ali Ebrahim, and Karsten Zengler.  2013.  Characterizing acetogenic metabolism using a genome-scale metabolic reconstruction of Clostridium ljungdahlii.  Microbial Cell Factories.  12:118.

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Harish Nagarajan, Mallory Embree, Amelia-Elena Rotaru, Pravin M. Shrestha, Adam M. Feist, Bernhard O. Palsson, Derek R. Lovley and Karsten Zengler.  2013.  Characterization and modelling of interspecies electron transfer mechanisms and microbial community dynamics of a syntrophic association.  Nature Communications.  4:2809.

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Amelia-Elena Rotaru, Pravin Malla Shrestha, Fanghua Liu, Minita Shrestha, Devesh Shrestha, Mallory Embree, Karsten Zengler, Colin Wardman, Kelly P. Nevin and Derek R. Lovley.  2014.  A new model for electron flow during anaerobic digestion: direct interspecies electron transfer to Methanosaeta for the reduction of carbon dioxide to methane.  Energy Environ. Sci.  7:408-416. 

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Tian Zhang, Pier-Luc Tremblay, Akhilesh Kumar Chaurasia, Jessica A. Smith, Timothy S. Bain, and Derek R. Lovley.  2013.  Anaerobic benzene oxidation via phenol in Geobacter metallireducens.  Applied and Environmental Microbiology.  doi: 10.1128/AEM.03134-13. 

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Roberto Orellana, Janet J. Leavitt, Luis R. Comolli, Roseann Csencsits, Noemie Janot, Kelly A. Flanagan, Arianna S. Gray, Ching Leang, Mounir Izallalen, Tünde Mester and Derek R. Lovley.  2013.  U(VI) Reduction by a Diversity of Outer Surface C-Type Cytochromes of Geobacter sulfurreducens.  Applied and Environmental Microbiology.  79:6369-6374.

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Guzel D. Tartakovsky, Alexandre M. Tartakovsky, Timothy D. Scheibe, Yilin Fang, Radhakrishnan Mahadevan, Derek R. Lovley.  2013.  Pore-scale simulation of microbial growth using a genome-scale metabolic model: Implications for Darcy-scale reactive transport.  Advances in Water Resources.  59:256-270. 

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Huarong Nie, Tian Zhang, Mengmeng Cui, Haiyun Lu, Derek R. Lovley and Thomas P. Russell.  2013.  Improved cathode for high efficient microbial-catalyzed reduction in microbial electrosynthesis cells.   Phys. Chem. Chem. Phys.  15:14290-14294.

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Dawn E Holmes, Ludovic Giloteaux, Kenneth H Williams, Kelly C Wrighton, Michael J Wilkins, Courtney A Thompson, Thomas J Roper, Philip E Long and Derek R Lovley.  2013.  Enrichment of specific protozoan populations during in situ bioremediation of uranium-contaminated groundwater.  The ISME Journal.  7:1286-1298.

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Kenneth H Williams, John R Bargar, Jonathan R Lloyd, and Derek R Lovley.  2013.  Bioremediation of uranium-contaminated groundwater: a systems approach to subsurface biogeochemistry.  Current Opinion in Biotech.  24:489-497. 

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Kenneth H. Williams, Michael J. Wilkins, A. Lucie N'Guessan, Bruce Arey, Elena Dodova, Alice Dohnalkova, Dawn Holmes, Derek R. Lovley, Philip E. Long.  2013.  Field evidence of selenium bioreduction in a uranium-contaminated aquifer.  Environmental Microbiology Reports.  5:444-452

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Derek R Lovley and Kelly P Nevin.  2013.  Electrobiocommodities: powering microbial production of fuels and commodity chemicals from carbon dioxide with electricity.  Current Opinion in Biotechnology.  24:385-390. 

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Yu Qiu, Harish Nagarajan, Mallory Embree, Wendy Shieu, Elisa Abate, Katy Jua´rez, Byung-Kwan Cho, James G. Elkins, Kelly P. Nevin, Christian L. Barrett, Derek R. Lovley, Bernhard O. Palsson & Karsten Zengler.  2013.  Characterizing the interplay between multiple levels of organization within bacterial sigma factor regulatory networks.  Nature Communications.  4:1755. 

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Ching Leang, Nikhil S. Malvankar, Ashley E. Franks, Kelly P. Nevin and Derek R. Lovley.  2013.  Engineering Geobacter sulfurreducens to Produce a Highly Cohesive Conductive Matrix with Enhanced Capacity for Current Production.  Energy Environ. Sci.  6:1901-1908.

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Alexander W. Thomas, Logan E. Garner, Kelly P. Nevin, Trevor L. Woodard, Ashley E. Franks, Derek R. Lovley, James J. Sumner, Christian J. Sund and Guillermo C. Bazan.  2013.  A lipid membrane intercalating conjugated oligoelectrolyte enables electrode driven succinate production in Shewanella.  Energy Environ. Sci.  6:1761-1765. 

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Pravin Malla Shrestha, Amelia-Elena Rotaru, Zarath M. Summers, Minita Shrestha, Fanghua Liu and Derek R. Lovley.  2013.  Transcriptomic and genetic analysis of direct interspecies electron transfer.  Applied and Environmental Microbiology.  79:2397-2404.

(AEM Article of Significant Interest)

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Pravin Malla Shrestha, Kelly P. Nevin, Minita Shrestha, and Derek R. Lovley.  2013.  When Is a Microbial Culture “Pure”? Persistent Cryptic Contaminant Escapes Detection Even with Deep Genome Sequencing.  mBio 4:e00591-1.  

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Madeline Vargas, Nikhil S. Malvankar, Pier-Luc Tremblay, Ching Leang, Jessica A. Smith, Pranav Patel, Oona Synoeyenbos-West, Kelly P. Nevin, and Derek R. Lovley.  2013.  Aromatic Amino Acids Required for Pili Conductivity and Long-Range Extracellular Electron Transport in Geobacter sulfurreducens.   mBio.  4:e00105-13.  

(mBio Editor's Pick Article)

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Michael J. Wilkins, Kelly C. Wrighton, Carrie D. Nicora, Kenneth H. Williams, Lee Ann McCue, Kim M. Handley, Chris S. Miller, Ludovic Giloteaux, Alison P. Montgomery, Derek R. Lovley, Jillian F. Banfield, Philip E. Long, and Mary S. Lipton.  2013.  Fluctuations in Species-Level Protein Expression Occur during Element and Nutrient Cycling in the Subsurface.  PLoS ONE 8:e57819. doi:10.1371/journal.pone.0057819

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Muktak Aklujkar, Maddalena V Coppi, Ching Leang, Byoung-Chan Kim, Milind A Chavan, Lorrie A Perpetua, Ludovic Giloteaux, Anna Liu and Dawn Holmes.  2013.  Proteins involved in electron transfer to Fe(III) and Mn(IV) oxides by Geobacter sulfurreducens and Geobacter uraniireducens.  Microbiology.  doi:10.1099/mic.0.064089-0

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Ludovic Giloteaux, Dawn E Holmes, Kenneth H Williams, Kelly C Wrighton, Michael J Wilkins, Alison P Montgomery, Jessica A Smith, Roberto Orellana, Courtney A Thompson, Thomas J Roper, Philip E Long and Derek R Lovley. 2012. Characterization and transcription of arsenic respiration and resistance genes during in situ uranium bioremediation.  The ISME Journal. 7:370-383.

(The ISME Journal top cited content of 2013)

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Tian Zhang,  Huarong Nie,  Timothy S. Bain,  Haiyun Lu,  Mengmeng Cui,  Oona L. Snoeyenbos-West,  Ashley E. Franks,  Kelly P. Nevin,  Thomas P. Russell, and Derek R. Lovley.  2013.  Improved cathode materials for microbial electrosynthesis.  Energy & Environmental Science.  6:217-224.

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Erin M. Conlon, Bradley L. Postier, Barbara A. Methé, Kelly P. Nevin, and Derek R. Lovley.  2012.  A Bayesian Model for Pooling Gene Expression Studies That Incorporates Co-Regulation Information.  PLoS ONE.  7(12): e52137.  doi:10.1371/journal.pone.0052137

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Pier-Luc Tremblay, Tian Zhang, Shabir A. Dar, Ching Leang, and Derek R. Lovley.  2012.  The Rnf Complex of Clostridium ljungdahlii Is a Proton-Translocating Ferredoxin:NAD+ Oxidoreductase Essential for Autotrophic Growth.  MBio. 4:1 e00406-12

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Yanming Gong, Ali Ebrahim, Adam M. Feist, Mallory Embree, Tian Zhang, Derek Lovley, and Karsten Zengler.  2012.  Sulfide-Driven Microbial Electrosynthesis.  Environ. Sci. Technol.  47:568−573.

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Muktak Aklujkar, Shelley A. Haveman, Raymond DiDonato Jr., Olga Chertkov, Cliff S. Han, Miriam L. Land, Peter Brown and Derek R. Lovley.  2012.  The genome of Pelobacter carbinolicus reveals surprising metabolic capabilities and physiological features.  BMC Genomics.  13:690.

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Dawn E. Holmes, Ludovic Giloteaux, Melissa Barlett, Milind A. Chavan, Jessica A. Smith, Kenneth H. Williams, Michael Wilkins, Philip Long, and Derek R. Lovley.  2012.  Molecular Analysis of the In Situ Growth Rate of Subsurface Geobacter Species.  Applied and Environmental Microbiology.  doi: 10.1128/​AEM.03263-12. 

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Derek R. Lovley.  2012.  Long-range electron transport to Fe(III) oxide via pili with metallic-like conductivity.  Biochemical Society Transactions.  40:1186-1190.

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Ching Leang, Toshiyuki Ueki, Kelly P. Nevin and Derek R. Lovley.  2013.  A genetic system for Clostridium ljungdahlii: a chassis for autotrophic production of biocommodities and a model Homoacetogen.  Appl. Environ. Microbiol.  79:doi:10.1128/AEM.02891-12. 

(AEM Article of Significant Interest)

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Jessica A. Smith, Derek R. Lovley and Pier- Luc Tremblay.  2012.  Outer Cell Surface Components Essential for Fe(III) Oxide Reduction by Geobacter metallireducens.  Appl. Environ. Microbiol.  doi:10.1128/AEM.02954-12.

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Amelia E. Rotaru, Pravin M. Shrestha, Fanghua Liu, Toshiyuki Ueki, Kelly Nevin, Zarath M. Summers and Derek R. Lovley.  2012. Interspecies electron transfer via hydrogen and formate rather than direct electrical connections in co-cultures of Pelobacter carbinolicus and Geobacter sulfurreducens.  Appl. Environ. Microbiol. 78:7645-7651.

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Kai Zhuang, Eugene Ma, Derek R. Lovley, and Radhakrishnan Mahadevan. 2012. The design of long-term effective uranium bioremediation strategy using a community metabolic model. Biotechnology and BioEngineering. 109:2475-2483.

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Tian Zhang, Timothy S. Bain, Kelly P. Nevin, Melissa A. Barlett and Derek R. Lovley.  2012.  Anaerobic Benzene Oxidation by Geobacter Species.  Appl. Environ. Microbiol.  78:8304.

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Jessica E Butler, Nelson D Young, Muktak Aklujkar, and Derek R Lovley.  2012.  Comparative genomic analysis of Geobacter sulfurreducens KN400, a strain with enhanced capacity for extracellular electron transfer and electricity production.  BMC Genomics  13:471.

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Fanghua Liu, Amelia E. Rotaru, Pravin M. Shrestha, Nikhil S. Malvankar, Kelly P. Nevin and Derek R. Lovley. 2012.  Promoting direct interspecies electron transfer with activated carbon.  Energy & Environmental Science 5:8982-8989.

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Nikhil S. Malvankar , Mark T. Tuominen and Derek R. Lovley. 2012.  Lack of Cytochrome Involvement in Long-Range Electron Transport through Conductive Biofilms and Nanowires of Geobacter sulfurreducens.  Energy Environ. Sci.  5:8651-8659

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Melissa Barlett, Hee Sun Moon, Aaron A. Peacock, David B. Hedrick, Kenneth H. Williams, Philip E. Long, Derek Lovley and Peter R. Jaffe.  2012.  Uranium reduction and microbial community development in response to stimulation with different electron donors.  Biodegradation.  23:535-546

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Derek R. Lovley. 2012. Electromicrobiology. Annu. Rev. Microbiol. 66:391–409. 

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Nikhil S. Malvankar, Joanne Lau, Kelly P. Nevin, Ashley E. Franks, Mark T. Tuominen and Derek R. Lovley.  2012.  Electrical Conductivity in a Mixed-Species Biofilm.  Appl. Environ. Microbiol.  78:5967-5971.

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Ashley E. Franks, Richard H. Glaven, and Derek R. Lovley. 2012. Real-Time Spatial Gene Expression Analysis within Current-Producing Biofilms. ChemSusChem. 5:1092-1098.

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Nikhil S. Malvankar and Derek R. Lovley. 2012. Microbial Nanowires: A New Paradigm for Biological Electron Transfer and Bioelectronics. ChemSusChem. 5:1039-1046.

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Zarath M. Summers, Toshiyuki Ueki, Wael Ismail, Shelley A. Haveman and Derek R. Lovley. 2012. Laboratory evolution of Geobacter sulfurreducens for enhanced growth on lactate via a single-base-pair substitution in a transcriptional regulator. ISME. 6:975-983

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Julia Krushkal, Yanhua Qu, Derek R. Lovley, and Ronald M. Adkins. 2012. Phylogenetic Classification of Diverse LysR-Type Transcriptional Regulators of a Model Prokaryote Geobacter sulfurreducens. Journal of  Molecular Evolution 74:187–205

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Pier-Luc Tremblay and Derek R. Lovley. 2012. Role of the NiFe Hydrogenase Hya in Oxidative Stress Defense in Geobacter sulfurreducens. Journal of Bacteriology. 194:2248–2253.

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Yuting Liang, Joy D. Van Nostrand, Lucie A. N'Guessan, Aaron D. Peacock, Ye Deng, Philip E. Long, C. Tom Resch, Liyou Wu,c Zhili He, Guanghe Li, Terry C. Hazen, Derek R. Lovley, and Jizhong Zhoua. 2012. Microbial Functional Gene Diversity with a Shift of Subsurface Redox Conditions during In Situ Uranium Reduction. Appl. Environ. Microbiol.  78:2966.

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Toshiyuki Ueki, Ching Leang, Kengo Inoue and Derek R. Lovley. 2012. Identification of Multicomponent Histidine-Aspartate Phosphorelay System Controlling Flagellar and Motility Gene Expression in Geobacter Species. The Journal of Biological Chemistry. 287:10958-10966.

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Melissa Barlett, Kai Zhuang, Radhakrishnan Mahadevan, and Derek R. Lovley. 2012.  Integrative analysis of Geobacter spp. and sulfate-reducing bacteria during uranium bioremediation. Biogeosciences.  9:1033-1040.

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Nikhil S. Malvankar, Mark T. Tuominena and Derek R. Lovley. 2012. Comment on ‘‘On electrical conductivity of microbial nanowires and biofilms’’ by S. M. Strycharz-Glaven, R.M. Snider, A. Guiseppi-Elie and L.M. Tender, Energy Environ. Sci., 2011, 4, 4366.  Energy Environ. Sci.  5:6247-6249.

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Nikhil S. Malvankar, Tünde Mester, Mark T. Tuominen, Derek R. Lovley. 2012. Supercapacitors Based on c-Type Cytochromes Using Conductive Nanostructured Networks of Living Bacteria. ChemPhysChem.  13:463 – 468.

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Nikhil S. Malvankar, Mark T. Tuominen and Derek R. Lovley. 2012. Biofilm conductivity is a decisive variable for high-current-density Geobacter sulfurreducens microbial fuel cells. Energy Environ. Sci.  5:5790-5797.

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Derek R. Lovley, Toshiyuki Ueki, Tian Zhang, Nikhil S. Malvankar, Pravin M. Shrestha, Kelly A. Flanagan, Muktak Aklujkar, Jessica E. Butler, Ludovic Giloteaux, Amelia-Elena Rotaru, Dawn E. Holmes, Ashley E. Franks, Roberto Orellana, Carla Risso and Kelly P. Nevin. 2011. Geobacter: The Microbe Electric’s Physiology, Ecology, and Practical Applications. Advances in Microbial Physiology. 59:1-100.

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Pier-Luc Tremblay, Muktak Aklujkar, Ching Leang, Kelly P. Nevin, and Derek Lovley. 2011. A genetic system for Geobacter metallireducens: role of the flagellin and pilin in the reduction of Fe(III) oxide. Environmental Microbiology Reports. 4:82–88.

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Kenneth H. Williams, Philip E. Long, James A. Davis, Michael J. Wilkins, A. Lucie N'Guessan, Carl I. Steefel, Li Yang, Darrell Newcomer, Frank A. Spane, Lee J. Kerkhof, Lora McGuinness, Richard Dayvault and Derek R. Lovley. 2011. Acetate Availability and its Influence on Sustainable Bioremediation of Uranium-Contaminated Groundwater. GEOMICROBIOLOGY JOURNAL. 28:519-539

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Derek R. Lovley. 2011. Live wires: direct extracellular electron exchange for bioenergy and the bioremediation of energy-related contamination. Energy Environ. Sci.  4:4896-4906

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Aaron D. Peacock, David B. Hedrick, Philip E. Long, Kelly P. Nevin, Charles T. Resch, Derek R. Lovley, and David C. White.  2011.  Field-scale uranium (VI) bioimmobilization monitored by lipid biomarkers and 13C-acetate incorporation.  Remediation Journal.  21:85–106. 

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Iain Anderson, Carla Risso, Dawn Holmes, Susan Lucas, Alex Copeland, Alla Lapidus, Jan-Fang Cheng, David Bruce, Lynne Goodwin, Samuel Pitluck, Elizabeth Saunders, Thomas Brettin, John C. Detter, Cliff Han, Roxanne Tapia, Frank Larimer, Miriam Land, Loren Hauser, Tanja Woyke, Derek Lovley, Nikos Kyrpides, and Natalia Ivanova. 2011. Complete genome sequence of Ferroglobus placidus AEDII12DO. 5(1):50-60.

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Toshiyuki Ueki, 2011. Identification of a Transcriptional Repressor Involved in Benzoate Metabolism in Geobacter bemidjiensis. Appl Environ Microbiol 77:7058–7062.

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Kelly P. Nevin, Pei Zhang, Ashley E. Franks, Trevor L. Woodard and Derek R. Lovley. 2011. Anaerobes unleashed: Aerobic fuel cells of Geobacter sulfurreducens. Journal of Power Sources. 196:7514-7518.

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Dawn E. Holmes, Carla Risso, Jessica A. Smith, and Derek R. Lovley.  2011.  Anaerobic Oxidation of Benzene by the Hyperthermophilic Archaeon Ferroglobus placidus.  Applied and Environmental Microbiology. 77:5926-5933

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Marzia Miletto, Kenneth H. Williams, A. Lucie N'Guessan, and Derek R. Lovley. 2011. Molecular Analysis of the Metabolic Rates of Discrete Subsurface Populations of Sulfate Reducers. Applied and Environmental Microbiology. 77:6502-6509.

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Masahiko Morita, Nikhil S. Malvankar, Ashley E. Franks, Zarath M. Summers, Ludovic Giloteaux, Amelia E. Rotaru, Camelia Rotaru, and Derek R. Lovley.  2011.  Potential for Direct Interspecies Electron Transfer in Methanogenic Wastewater Digester Aggregates.  mBio.  2:e00159-11

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Nikhil S. Malvankar, Madeline Vargas, Kelly P. Nevin, Ashley E. Franks, Ching Leang, Byoung-Chan Kim, Kengo Inoue, Tünde Mester, Sean F. Covalla, Jessica P. Johnson, Vincent M. Rotello, Mark T. Tuominen and Derek R. Lovley. 2011. Tunable metallic-like conductivity in microbial nanowire networks. Nature Nanotechnology. 6:573–579.

(Article Metrics Score is in the 99% of Similarly Aged Articles within All Sampled Journals)

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Jullia Krushkal, Sreedhar Sontineni, Ching Leang, Yanhua Qu, Ronald Adkins, Derek Lovley. 2011. Genome Diversity of the TetR Family of Transcriptional Regulators in a Metal-Reducing Bacterial Family Geobacteraceae and Other Microbial Species. OMICS 15:495-506.

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Jiae Yun, Toshiyuki Ueki, Marzia Miletto, and Derek Lovley. 2011. Monitoring the Metabolic Status of Geobacter Species in Contaminated Groundwater by Quantifying Key Metabolic Proteins with Geobacter-Specific Antibodies. Applied and Environmental Microbiology. 77:4597-4602.

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Dawn E. Holmes, Carla Risso, Jessica A. Smith and Derek R. Lovley. 2011. Genome-scale analysis of anaerobic benzoate and phenol metabolism in the hyperthermophilic archaeon Ferroglobus placidus. The ISME Journal 6:146–157

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Muktak Aklujkar. 2011. Two ATP phosphoribosyltransferase isozymes of Geobacter sulfurreducens contribute to growth in the presence or absence of histidine and under nitrogen fixation conditions. Canadian Journal of Microbiology 57(7):547-558.

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Derek R. Lovley. 2011. Reach out and touch someone: potential impact of DIET (direct interspecies energy transfer) on anaerobic biogeochemistry, bioremediation, and bioenergy. Environ Sci Biotechnol. 10:101–105

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Kelly P. Nevin, Sarah A. Hensley, Ashley E. Franks, Zarath M. Summers, Jianhong Ou, Trevor L. Woodard, Oona L. Snoeyenbos-West, and Derek R. Lovley. 2011. Electrosynthesis of Organic Compounds from Carbon Dioxide Catalyzed by a Diversity of Acetogenic Microorganisms. Applied and Environmental Microbiology. 77:2882-2886

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Xinlei Qian, Tünde Mester, Leonor Morgado, Tsutomu Arakawa, Manju L. Sharma, Kengo Inoue, Crisjoe Joseph, Carlos A. Salgueiro, Michael J. Maroney, Derek R. Lovley. 2011. Biochemical characterization of purified OmcS, a c-type cytochrome required for insoluble Fe(III) reduction in Geobacter sulfurreducens. Biochim Biophys Acta 1807:404-12.

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Kengo Inoue, Ching Leang, Ashley E. Franks, Trevor L. Woodard, Kelly P. Nevin, and Derek R. Lovley. 2011. Specific localization of the c-type cytochrome OmcZ at the anode surface in current-producing biofilms of Geobacter sulfurreducens. Environmental Microbiology Reports. 3:211–217.

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Radhakrishnan Mahadevan, Bernhard Ø. Palsson and Derek R. Lovley. 2011. In situ to in silico and back: elucidating the physiology and ecology of Geobacter spp. using genome-scale modelling. Nature Reviews 9:39-50.

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Sarah M. Strycharz, Richard H. Glaven, Maddalena V. Coppi, Sarah M. Gannon, Lorrie A. Perpetua, Anna Liu, Kelly P. Nevin, Derek R. Lovley. 2011. Gene expression and deletion analysis of mechanisms for electron transfer from electrodes to Geobacter sulfurreducens. Bioelectrochemistry 80:142-150.

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Derek R. Lovley and Kelly P. Nevin. 2011. A shift in the current: New applications and concepts for microbe-electrode electron exchange. Current Opinion in Biotechnology.  22:441-448.

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Yilin Fang, Timothy D. Scheibe, Radhakrishnan Mahadevan, Srinath Garg, Philip E. Long, and Derek R. Lovley.  2011. Direct coupling of a genome-scale microbial in silico model and a groundwater reactive transport model. J Contam Hydrol.  122:96-103. 

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Derek R. Lovley. 2011. Powering microbes with electricity: direct electron transfer from electrodes to microbes. Environmental Microbiology Reports. 3:27–35.

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Kai Zhuang, Mounir Izallalen, Paula Mouser, Hanno Richter, Carla Risso, Radhakrishnan Mahadevan and Derek R Lovley. 2011. Genome-scale dynamic modeling of the competition between Rhodoferax and Geobacter in anoxic subsurface environments. The ISME Journal. 5:305–316.

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Michael J. Wilkins, Stephen J. Callister, Marzia Miletto, Kenneth H. Williams, Carrie D. Nicora, Derek R. Lovley, Philip E. Long and Mary S. Lipton. 2011. Development of a biomarker for Geobacter activity and strain composition; Proteogenomic analysis of the citrate synthase protein during bioremediation of U(VI). Microbial Biotechnology 4:55-63.

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Pier-Luc Tremblay, Zarath M. Summers, Richard H. Glaven, Kelly P. Nevin, Karsten Zengler, Christian L. Barrett, Yu Qiu, Bernhard Ø. Palsson, and Derek R. Lovley. 2011. A c-type cytochrome and a transcriptional regulator responsible for enhanced extracellular electron transfer in Geobacter sulfurreducens revealed by adaptive evolution. Environmental  Microbiology 13:13-23.

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Stephen J. Callister, Michael J. Wilkins, Carrie D. Nicora, Kenneth H. Williams, Jillian F Banfield, Nathan C. Verberkmoes, Robert L, Hettich, Lucie N'Guessan, Paula J Mouser, Hila Elifantz, Richard D Smith, Derek R. Lovley, Mary S. Lipton, and Philip E. Long. 2010. Analysis of Biostimulated Microbial Communities from Two Field Experiments Reveals Temporal and Spatial Differences in Proteome Profiles. Environmental Science & Technology 44:8897-903.

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Jun Sun, Shelley A Haveman, Olivia Bui, Tom R Fahland, Derek R Lovley. 2010. Constraint-based modeling analysis of the metabolism of two Pelobacter species. BMC Systems Biology 4:174.

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Yu Qiu, Byung-Kwan Cho, Young Seoub Park, Derek Lovley, Bernhard Ø. Palsson and Karsten Zengler. 2010. Structural and operational complexity of the Geobacter sulfurreducens genome. Genome Research 20:1304-1311.

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Yu Qiu, Byung-Kwan Cho, Young S. Park, Derek R. Lovley, Bernhard Ø. Palsson, and Karsten Zengler. 2010. Structural and operational complexity of the Geobacter sulfurreducens genome. Genome Res. 20:1304-1311.

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Sarah M. Strycharz, Anthony P. Malanoski, Rachel M. Snider, Hana Yi, Derek R. Lovley, and Leonard M. Tender. 2010. Application of cyclic voltammetry to investigate enhanced catalytic current generation by biofilm-modified anodes of Geobacter sulfurreducens strain DL1 vs. variant strain KN400. Energy & Environmental Science. 4:896-913

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Zarath M. Summers, Heather E. Fogarty, Ching Leang, Ashley E. Franks, Nikhil S. Malvankar, and Derek R. Lovley. 2010. Direct Exchange of Electrons Within Aggregates of an Evolved Syntrophic Co-Culture of Anaerobic Bacteria. Science 330:1413-1415.

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Julia Krushkal, Katy Juárez, Jose F. Barbe, Yanhua Qu, Angel Andrade, Marko Puljic, Ronald M. Adkins, Derek R Lovley, and Toshiyuki Ueki. 2010. Genome-wide survey for PilR recognition sites of the metal-reducing prokaryote Geobacter sulfurreducens. Gene. 469:31-44.

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Muktak Aklujkar, Nelson D. Young, Dawn Holmes, Milind Chavan, Carla Risso, Hajnalka E. Kiss, Cliff S. Han, Miriam L. Land, Derek R. Lovley. 2010. The genome of Geobacter bemidjiensis, exemplar for the subsurface clade of Geobacter species that predominate in Fe(III)-reducing subsurface environments. BMC Genomics 11:490.

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Muktak Aklujkar, and Derek R. Lovley. 2010. Interference with histidyl-tRNA synthetase by a CRISPR spacer sequence as a factor in the evolution of Pelobacter carbinolicus. BMC Evol Biol 10:230.

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Toshiyuki Ueki, and Derek R. Lovley. 2010. Novel regulatory cascades controlling expression of nitrogen-fixation genes in Geobacter sulfurreducens. Nucleic Acids Research 38:7485-7499.

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Tae Hoon Yang, Maddalena V Coppi, Derek R Lovley, Jun Sun. 2010. Metabolic response of Geobacter sulfurreducens towards electron donor/acceptor variation. Microbial Cell Factories 9:90

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Anna Klimes, Ashley E. Franks, Richard H. Glaven, Hoa Tran, Christian L. Barrett, Yu Qiu, Karsten Zengler, and Derek R. Lovley. 2010. Production of pilus-like filaments in Geobacter sulfurreducens in the absence of the type IV pilin protein PilA. FEMS Microbiol Lett 310:62-68.

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Ashley E. Franks, Nikhil Malvankar, and Kelly P. Nevin. 2010. Bacterial biofilms: the powerhouse of a microbial fuel cell. Biofuels 1:589-604.

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Kenneth H. Williams, A. Lucie N’Guessan, Jennifer Druhan, Philip E. Long, Susan S. Hubbard, Derek R. Lovley, and Jillian F. Banfield. 2010. Electrodic voltages accompanying stimulated bioremediation of a uranium-contaminated aquifer. J. Geophys. Res.-Biogeosci. 115:1-10.

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Harish Nagarajan, Jessica E. Butler, Anna Klimes, Yu Qiu, Karsten Zengler, Joy Ward, Nelson D. Young, Barbara A. Methé, Bernhard Ø. Palsson, Derek R. Lovley, Christian L. Barrett. 2010. De Novo assembly of the complete genome of an enhanced electricity-producing variant of Geobacter sulfurreducens using only short reads. PLoS One 5:e10922.

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Hila Elifantz, Lucie A. N'Guessan, Paula J. Mouser, Kenneth H. Williams, Michael J. Wilkins, Carla Risso, Dawn E. Holmes, Philip E. Long, Derek R. Lovley. 2010. Expression of acetate permease-like (apl) genes in subsurface communities of Geobacter species under fluctuating acetate concentrations. FEMS Microbiol Ecology 73:441-449.

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Kelly P. Nevin, Trevor L. Woodard, Ashley E. Franks, Zarath M. Summers, and Derek R. Lovley. 2010. Microbial electrosynthesis: feeding microbes electricity to convert carbon dioxide and water to multicarbon extracellular organic compounds. mBio 1:e00103-10.

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Ashley E. Franks, and Kelly P. Nevin. 2010. Microbial fuel cells, a current review. Energies 3:899-919.

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Ashley E. Franks. 2010. Transcriptional analysis in microbial fuel cells: common pitfalls in global gene expression studies of microbial biofilms. FEMS Microbiol Lett 307:111-112.

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Kengo Inoue, Xinlei Qian, Leonor Morgado, Byoung-Chan Kim, Tünde Mester, Mounir Izallalen, Carlos A. Salgueiro, and Derek R. Lovley. 2010. Purification and characterization of OmcZ, an outer-surface, octaheme c-type cytochrome essential for optimal current production by Geobacter sulfurreducens. Appl Environ Microbiol 76:3999-4007.

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Ching Leang, Xinlei Qian, Tünde Mester, and Derek R. Lovley 2010. Alignment of the c-type cytochrome OmcS along pili of Geobacter sulfurreducens. Appl Environ Microbiol 76:4080-4084.

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Jiao Zhao, Yilin Fang, Timothy D. Scheibe, Derek R. Lovley, Radhakrishnan Mahadevan. 2010. Modeling and sensitivity analysis of electron capacitance for Geobacter in sedimentary environments. J Contam Hydrol 112:30-44.

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Sarah M. Strycharz, Sarah M. Gannon, Amber R. Boles, Ashley E. Franks, Kelly P. Nevin, Derek R. Lovley. 2010. Reductive dechlorination of 2-chlorophenol by Anaeromyxobacter dehalogenans with an electrode serving as the electron donor. Environ Microbio Reports 2:289-294.

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James W. Voordeckers, Byoung-Chan Kim, Mounir Izallalen, and Derek R. Lovley. 2010. Role of Geobacter sulfurreducens outer-surface c-type cytochromes in the reduction of soil humic acid and anthraquinone-2,6-disulfonate. Appl Environ Microbiol 76:2371-2375.

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Toshiyuki Ueki, and Derek R. Lovley. 2010. Genome-wide gene regulation of biosynthesis and energy generation by a novel transcriptional repressor in Geobacter species. Nucleic Acids Res 38:810-821.

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Tian Zhang, Sarah M. Gannon, Kelly P. Nevin, Ashley E. Franks, Derek R. Lovley. 2010. Stimulating the anaerobic degradation of aromatic hydrocarbons in contaminated sediments by providing an electrode as the electron acceptor. Environ Microbiol 12:1011-1020.

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Jessica E Butler, Nelson D Young, and Derek R Lovley. 2010. Evolution of electron transfer out of the cell: comparative genomics of six Geobacter genomes. BMC Genomics 11:40.

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A. Lucie N'Guessan, Hila Elifantz, Kelly P. Nevin, Paula J. Mouser, Barbara Methé, Trevor L. Woodard, Kimberly Manley, Kenneth H. Williams, Michael J. Wilkins, Joern T. Larsen, Philip E. Long and Derek R. Lovley. 2010. Molecular analysis of phosphate limitation in Geobacteraceae during the bioremediation of a uranium-contaminated aquifer. ISME J 4:253-66.

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Kenneth H. Williams, Kelly P. Nevin, Ashley E. Franks, Andreas Englert, Philip E. Long, and Derek R. Lovley. 2010. Electrode-based approach for monitoring in situ microbial activity during subsurface bioremediation. Environ Sci Technol 44:47-54.

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Ashley E. Franks, Kelly P. Nevin, Richard H. Glaven, and Derek R Lovley. 2010. Microtoming coupled to microarray analysis to evaluate the spatial metabolic status of Geobacter sulfurreducens biofilms. ISME J 4:509-519.

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James W. Voordeckers, Byoung-Chan Kim, Mounir Izallalen, and Derek R. Lovley. 2010. Role of Geobacter sulfurreducens Outer Surface c-Type Cytochromes in Reduction of Soil Humic Acid and Anthraquinone-2,6-Disulfonate. Applied and Environmental Microbiology. 76(7):2371-2375.

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Julia Krushkal, Ronald M Adkins, Yanhua Qu, Jeanette Peeples, Sreedhar Sontineni, Ching Leang, Peter Brown, Nelson D Young, Toshiyuki Ueki, Katy Juarez, and Derek R Lovley. 2010. Bioinformatic analysis of gene regulation in the metal-reducing bacterial family Geobacteraceae. BMC Bioinformatics. 11:11.

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Erin M. Conlon, Bradley L. Postier, Barbara A Methé, Kelly P. Nevin, Derek R. Lovley. 2009. Hierarchical Bayesian meta-analysis models for cross-platform microarray studies. J Appl Stat 36:1067-1085.

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Michael J. Wilkins, Nathan C. VerBerkmoes, Kenneth H. Williams, Stephen J. Callister, Paula J. Mouser, Hila Elifantz, A. Lucie N'Guessan, Brian C. Thomas, Carrie D. Nicora, Manesh B. Shah, Paul Abraham, Mary S. Lipton, Derek R. Lovley, Robert L. Hettich, Philip E. Long, and Jillian F. Banfield. 2009. Proteogenomic monitoring of Geobacter physiology during stimulated uranium bioremediation. Appl Environ Microbiol 75:6591-6599.

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Yanhua Qu, Peter Brown, Jose F. Barbe, Marko Puljic, Enrique Merino, Ronald M. Adkins, Derek R. Lovley, and Julia Krushkal. 2009. GSEL version 2, an online genome-wide query system of operon organization and regulatory sequence elements of Geobacter sulfurreducens. OMICS 13:439-49.

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Muktak Aklujkar, Julia Krushkal, Genevieve DiBartolo, Alla Lapidus, Miriam L. Land, and Derek R. Lovley. 2009. The genome sequence of Geobacter metallireducens: features of metabolism, physiology and regulation common and dissimilar to Geobacter sulfurreducens. BMC Microbiol 9:109.

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Paula J Mouser, Dawn E Holmes, Lorrie A Perpetua, Raymond DiDonato, Brad Postier, Anna Liu, Derek R Lovley. 2009. Quantifying expression of Geobacter spp. oxidative stress genes in pure culture and during in situ uranium bioremediation. ISME J 3:454-65.

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Paula J Mouser, A Lucie N'Guessan, Hila Elifantz, Dawn E Holmes, Kenneth H Williams, Michael J Wilkins, Philip E Long, Derek R Lovley. 2009. Influence of heterogeneous ammonium availability on bacterial community structure and the expression of nitrogen fixation and ammonium transporter genes during in situ bioremediation of uranium-contaminated groundwater. Environ Sci Technol 43:4386-92.

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Kelly P. Nevin, Byoung-Chan Kim, Richard H. Glaven, Jessica P. Johnson, Trevor L. Woodard, Barbara A. Methé, Raymond J. DiDonato, Jr, Sean F. Covalla, Ashley E. Franks, Anna Liu, and Derek R. Lovley. 2009. Anode biofilm transcriptomics reveals outer surface components essential for high density current production in Geobacter sulfurreducens fuel cells. PLoS ONE 4:e5628.

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Hanno Richter, Kelly P. Nevin, Hongfei Jia, Daniel A. Lowy, Derek R. Lovley and Leonard M. Tender. 2009. Cyclic voltammetry of biofilms of wild type and mutant Geobacter sulfurreducens on fuel cell anodes indicates possible roles of OmcB, OmcZ, type IV pili, and protons in extracellular electron transfer. Energy Environ Sci 2:506-516.

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Hana Yia, Kelly P. Nevin, Byoung-Chan Kim, Ashely E. Franks, Anna Klimes, Leonard M. Tender, Derek R. Lovley. 2009. Selection of a variant of Geobacter sulfurreducens with enhanced capacity for current production in microbial fuel cells. Biosens Bioelectron 24:3498-3503.

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Jessica E Butler, Nelson D Young and Derek R Lovley. 2009. Evolution from a respiratory ancestor to fill syntrophic and fermentative niches: comparative genomics of six Geobacteraceae species. BMC Genomics 10:103.

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Derek R. Lovley. 2009. Future shock from the microbe electric (in Crystal Ball). Microbial Biotechnology 2:128-156.

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David B. Hedrick, Aaron D. Peacock, Derek R. Lovley, Trevor L. Woodard, Kelly P. Nevin, Philip E. Long, and David C. White. 2009. Polar lipid fatty acids, LPS-hydroxy fatty acids, and respiratory quinones of three Geobacter strains, and variation with electron acceptor. J Ind Microbiol Biotechnol 36:205-209.

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Timothy D. Scheibe, Radhakrishnan Mahadevan, Yilin Fang, Srinath Garg, Philip E. Long, Derek R. Lovley. 2009. Coupling a genome-scale metabolic model with a reactive transport model to describe in situ uranium bioremediation. Microbial Biotechnology 2:274-286.

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Jun Sun, Bahareh Sayyar, Jessica E Butler, Priti Pharkya, Tom R Fahland, Iman Famili, Christophe H Schilling, Derek R Lovley, and Radhakrishnan Mahadevan. 2009. Genome-scale constraint-based modeling of Geobacter metallireducens. BMC Syst Biol 3:15.

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Dawn E Holmes, Regina A O'Neil, Milind A Chavan, Lucie A N'Guessan, Helen A Vrionis, Lorrie A Perpetua, M Juliana Larrahondo, Raymond DiDonato, Anna Liu and Derek R Lovley. 2009. Transcriptome of Geobacter uraniireducens growing in uranium-contaminated subsurface sediments. ISME J 3:216-230.

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Ashley E. Franks, Kelly P. Nevin, Hongfei Jia, Mounir Izallalen, Trevor L. Woodard and Derek R. Lovley. 2009. Novel strategy for three-dimensional real-time imaging of microbial fuel cell communities: monitoring the inhibitory effects of proton accumulation within the anode biofilm. Energy Environ Sci 2:113-119.

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Julia Krushkal, Ching Leang, Jose F. Barbe, Yanhua Qu, Bin Yan, Marko Puljic, Ronald M. Adkins and Derek R. Lovley. 2009. Diversity of promoter elements in a Geobacter sulfurreducens mutant adapted to disruption in electron transfer. Funct Integr Genomics 9:15-25.

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Katy Juárez, Byoung-Chan Kim, Kelly Nevin, Leticia Olvera, Gemma Reguera, Derek R. Lovley, and Barbara A. Methé. 2009. PilR, a transcriptional regulator for pilin and other genes required for Fe(III) reduction in Geobacter sulfurreducens. J Mol Microbiol Biotechnol 16:146-158.

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Carla Risso, Jun Sun, Kai Zhuang, Radhakrishnan Mahadevan, Robert DeBoy, Wael Ismail, Susmita Shrivastava, Heather Huot, Sagar Kothari, Sean Daugherty, Olivia Bui, Christophe H Schilling, Derek R Lovley, and Barbara A Methé. 2009. Genome-scale comparison and constraint-based metabolic reconstruction of the facultative anaerobic Fe(III)-reducer Rhodoferax ferrireducens. BMC Genomics 10:1-19.

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Ching Leang, Julia Krushkal, Toshiyuki Ueki, Marko Puljic, Jun Sun, Katy Juárez, Cinthia Núñez, Gemma Reguera, Raymond DiDonato, Bradley Postier, Ronald M Adkins and Derek R Lovley. 2009. Genome-wide analysis of the RpoN regulon in Geobacter sulfurreducens. BMC Genomics 10:331.

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Julia Krushkal, Yanhua Qu, Peter Brown, Sreedhar Sontineni, Toshiyuki Ueki, Katy Juarez, Ching Leang, Enrique Merino, Jeanette Peeples, Jose F Barbe, Ronald M Adkins and Derek R Lovley. 2009. Bioinformatic analysis of gene regulation in Geobacter sulfurreducens. BMC Bioinformatics. 10:2371–2375.

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Byoung-Chan Kim, Bradley L. Postier, Raymond J. DiDonato, Swades K. Chaudhuri, Kelly P. Nevin and Derek R. Lovley. 2008. Corrigendum to "Insights into genes involved in electricity generation in Geobacter sulfurreducens via whole genome microarray analysis of the OmcF-deficient mutant". Bioelectrochemistry 74(1):222.

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Derek R. Lovley. 2008. The microbe electric: conversion of organic matter to electricity. Curr Opin Biotechnol 19:564-571.

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Yan-Huai R. Ding, 1, Kim K. Hixson, Muktak A. Aklujkar, Mary S. Lipton, Richard D. Smith, Derek R. Lovley and Tünde Mester. 2008. Proteome of Geobacter sulfurreducens grown with Fe(III) oxide or Fe(III) citrate as the electron acceptor. Biochim Biophys Acta 1784:1935-1941.

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Radhakrishnan Mahadevan, Bin Yan, Brad Postier, Kelly P Nevin, Trevor L Woodard, Regina O'Neil, Maddalena V Coppi, Barbara A Methé, Julia Krushkal. 2008. Characterizing regulation of metabolism in Geobacter sulfurreducens through genome-wide expression data and sequence analysis. OMICS 12:33-59.

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Radhakrishnan Mahadevan, and Derek R. Lovley. 2008. The degree of redundancy in metabolic genes is linked to mode of metabolism. Biophys J 94:1216-1220.

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Hoa T Tran, Julia Krushkal, Frances M Antommattei, Derek R Lovley and Robert M Weis. 2008. Comparative genomics of Geobacter chemotaxis genes reveals diverse signaling function. BMC Genomics 9:471.

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Sarah M. Strycharz, Trevor L. Woodard, Jessica P. Johnson, Kelly P. Nevin, Robert A. Sanford, Frank E. Löffler, and Derek R. Lovley. 2008. Graphite electrode as a sole electron donor for reductive dechlorination of tetrachlorethene by Geobacter lovleyi. Appl Environ Microbiol 74:5943-5947.

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Byoung-Chan Kim, and Derek R. Lovley. 2008. Investigation of direct vs. indirect involvement of the c-type cytochrome MacA in Fe(III) reduction by Geobacter sulfurreducens. FEMS Microbiol Lett 286:39-44.

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Laura Villanueva, Shelly A. Haveman, Zarath M. Summers, and Derek R. Lovley. 2008. Quantification of Desulfovibrio vulgaris dissimilatory sulfite reductase gene expression during electron donor and acceptor-limited growth. Appl Environ Microbiol 74:5850-5853.

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Carla Risso, Barbara A. Methé, Hila Elifantz, Dawn E. Holmes, and Derek R. Lovley. 2008. Highly conserved genes in Geobacter species With expression patterns indicative of acetate limitation. Microbiology 154:2589-2599.

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Mounir Izallalena, Radhakrishnan Mahadevan, Anthony Burgard, Bradley Postier, Raymond Didonato Jr., Jun Sun, Christopher H. Schilling and Derek R. Lovley. 2008. Geobacter sulfurreducens strain engineered for increased rates of respiration. Metab Eng 10:267-275.

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Kelly P. Nevin, H. Richter, S.F. Covalla, J.P. Johnson, T.L. Woodard, A.L. Orloff, H. Jia, M. Zhang, and D.R. Lovley. 2008. Power output and columbic efficiencies from biofilms of Geobacter sulfurreducens comparable to mixed community microbial fuel cells. Environ Microbiol 10:2505-2514.

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Shelley A. Haveman, Raymond J. DiDonato, Jr., Laura Villanueva, Evgenya S. Shelobolina, Bradley L. Postier, Bo Xu, Anna Liu, and Derek R. Lovley. 2008. Genome-wide gene expression patterns and growth requirements suggest that Pelobacter carbinolicus reduces Fe(III) indirectly via sulfide production. Appl Environ Microbiol 74:4277-4284.

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Bradley Postier, Raymond DiDonato Jr., Kelly P. Nevin, Anna Liu, Bryan Frank, Derek Lovley and Barbara A. Methe. 2008. Benefits of in-situ synthesized microarrays for analysis of gene expression in understudied microorganisms. J Microbiol Methods 74:26-32.

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Byoung-Chan Kim, Bradley L. Postier, Raymond J. DiDonato, Swades K. Chaudhuri, Kelly P. Nevin and Derek R. Lovley. 2008. Insights into genes involved in electricity generation in Geobacter sulfurreducens via whole genome microarray analysis of the OmcF-deficient mutant. Bioelectrochemistry 73:70-75.

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Julia Krushkal, Marko Puljic, Bin Yan, Jose F. Barbe, Radhakrishnan Mahadevan, Bradley Postier, Regina A. O'Neil, Gemma Reguera, Ching Leang, Laurie N. DiDonato, Cinthia Núñez, Barbara A. Methé, Ronald M. Adkins, Derek R. Lovley.  2008. Genome regions involved in multiple regulatory pathways identified using GSEL, a genome-wide database of regulatory sequence elements of Geobacter sulfurreducens. International Conference on BioMedical Engineering and Informatics. pp. 424-431.

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Derek R. Lovley. 2008. Extracellular electron transfer: wires, capacitors, iron lungs, and more. Geobiology 6:225-231.

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Derek R. Lovley, Kelly P. Nevin. 2008. Chapter 23: Electricity production with electricigens. In J. Wall et al. (ed.), Bioenergy. ASM Press, Washington, DC. pp. 295-306.

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Regina A. O’Neil, Dawn E. Holmes, Maddalena V. Coppi, Lorrie A. Adams, M. Juliana Larrahondo, Joy E. Ward, Kelly P. Nevin, Trevor L. Woodard, Helen A. Vrionis, A. Lucie N’Guessan and Derek R. Lovley. 2008. Gene transcript analysis of assimilatory iron limitation in Geobacteraceae during groundwater bioremediation. Environ Microbiol 10:1218-1230.

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Evgenya S. Shelobolina, Helen A. Vrionis, Robert H. Findlay and Derek R. Lovley. 2008. Geobacter uraniireducens sp. nov., isolated from subsurface sediment undergoing uranium bioremediation. Int J Syst Evol Microbiol 58:1075-1078.

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Dawn E. Holmes, Tünde Mester, Regina A. O'Neil, Lorrie A. Perpetua, M. Juliana Larrahondo, Richard Glaven, Manju L. Sharma, Joy E. Ward, Kelly P. Nevin and Derek R. Lovley. 2008. Genes for two multicopper proteins required for Fe(III) oxide reduction in Geobacter sulfurreducens have different expression patterns both in the subsurface and on energy-harvesting electrodes. Microbiology 154:1422-1435.

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Kuk-Jeong Chin, Manju L. Sharma, Lyndsey A. Russell, Kathleen R. O’Neill and Derek R. Lovley. 2008. Quantifying expression of a dissimilatory (bi)sulfite reductase gene in petroleum-contaminated marine harbor sediments. Microb Ecol 55:489-499.

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Hanno Richter, Kevin McCarthy, Kelly P. Nevin, Jessica P. Johnson, Vincent M. Rotello, and Derek R. Lovley. 2008. Electricity generation by Geobacter sulfurreducens attached to gold electrodes. Langmuir 24:4376-4379.

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A. Lucie N’Guessan, Helen A. Vrionis, Charles T. Resch, Philip E. Long and Derek R. Lovley. 2008. Sustained removal of uranium from contaminated groundwater following stimulation of dissimilatory metal reduction. Environ Sci Technol 42:2999-3004.

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Carla Risso, Stephen J. Van Dien, Amber Orloff, Derek R. Lovley, and Maddalena V. Coppi. 2008. Elucidation of an alternate isoleucine biosynthesis pathway in Geobacter sulfurreducens. J Bacteriol 190:2266-2274.

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Daniel Segura, Radhakrishnan Mahadevan, Katy Juárez, Derek R. Lovley. 2008. Computational and experimental analysis of redundancy in the central metabolism of Geobacter sulfurreducens. PLoS Comput Biol 4:e36.

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Derek R. Lovely, Radhakrishnan Mahadevan, and Kelly P. Nevin. 2008. Systems biology approach to bioremediation with extracellular electron transfer. In E. Diaz (ed.), Microbial biodegradation, Genomics and molecular biology. Caister Academic Press, Norfolk, UK. pp. 71-96.

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Kazem Kashefi, Bruce M. Moskowitz, and Derek R. Lovley. 2008. Characterization of extracellular minerals produced during dissimilatory Fe(III) and U(VI) reduction at 100 ° by Pyrobaculum islandicum. Geobiology 6:147-154.

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Kazem Kashefi, Evgenya S. Shelobolina, W. Crawford Elliott, and Derek R. Lovley. 2008. Growth of thermophilic and hyperthermophilic Fe(III)-reducing microorganisms on a ferruginous smectite as the sole electron acceptor. Appl Environ Microbiol 74:251-258.

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Abraham Esteve-Núñez, Julian Sosnik, Pablo Visconti and Derek R. Lovley. 2008. Fluorescent properties of c-type cytochromes reveal their potential role as an extracytoplasmic electron sink in Geobacter sulfurreducens. Environ Microbiol 10:497-505.

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Martin Lanthier, Kelvin B Gregory, Derek R Lovley. 2008. Growth with high planktonic biomass in Shewanella oneidensis fuel cells. FEMS Microbiol Lett 278:29-35.

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Dawn E Holmes, Regina A O'Neil, Helen A Vrionis, Lucie A N'Guessan, Irene Ortiz-Bernad, Maria J Larrahondo, Lorrie A Adams, Joy A Ward, Julie S Nicoll, Kelly P Nevin, Milind A Chavan, Jessica P Johnson, Philip E Long and Derek R Lovley. 2007. Subsurface clade of Geobacteraceae that predominates in a diversity of Fe(III)-reducing subsurface environments. ISME J 1:663-677.

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Angela J. Ahrendt, Sandra L. Tollaksen, Carl Lindberg, Wenhong Zhu, John R. Yates III, Kelly P. Nevin, György Babnigg, Derek R. Lovley and Carol S. Giometti. 2007. Steady state protein levels in Geobacter metallireducens grown with iron (III) citrate or nitrate as terminal electron acceptor. Proteomics 7:4148-4157.

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Xinlei Qian, Gemma Reguera, Tünde Mester, Derek R Lovley. 2007. Evidence that OmcB and OmpB of Geobacter sulfurreducens are outer membrane surface proteins. FEMS Microbiology Letters 277:21-27.

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Maddalena V. Coppi, Regina A. O'Neil, Ching Leang, Franz Kaufmann, Barbara A. Methé, Kelly P. Nevin, Trevor L. Woodard, Anna Liu and Derek R. Lovley. 2007. Involvement of Geobacter sulfurreducens SfrAB in acetate oxidation rather than intracellular, respiration-linked Fe(III) citrate reduction. Microbiology 153:3572-3585.

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Bin Yan, Derek R. Lovley and Julia Krushkal. 2007. Genome-wide similarity search for transcription factors and their binding sites in a metal-reducing prokaryote Geobacter sulfurreducens. BioSystems 90:421-441.

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Jessica E Butler, Qiang He, Kelly P Nevin, Zhili He, Jizhong Zhou and Derek R Lovley. 2007. Genomic and microarray analysis of aromatics degradation in Geobacter metallireducens and comparison to a Geobacter isolate from a contaminated field site. BMC Genomics 8:180.

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Hanno Richter, Martin Lanthier, Kelly P. Nevin, and Derek R. Lovley. 2007. Lack of electricity production by Pelobacter carbinolicus indicates that the capacity for Fe(III) oxide reduction does not necessarily confer electron transfer ability to fuel cell anodes. Appl Environ Microbiol 73:5347-5353.

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Toshiyuki Ueki and Derek R. Lovley. 2007. Heat-shock sigma factor RpoH from Geobacter sulfurreducens. Microbiology 153:838-846.

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Dawn E. Holmes, Kelly P. Nevin, Trevor L. Woodard, Aaron D. Peacock and Derek R. Lovley. 2007. Prolixibacter bellariivorans gen. nov., sp. nov., a sugar-fermenting, psychrotolerant anaerobe of the phylum Bacteroidetes, isolated from a marine-sediment fuel cell. Int J Syst Evol Microbiol 57:701-707.

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Kelly P. Nevin, Dawn E. Holmes, Trevor L. Woodard, Sean F. Covalla and Derek R. Lovley. 2007. Reclassification of Trichlorobacter thiogenes as Geobacter thiogenes comb. nov. Int J Syst Evol Microbiol 57:463-466.

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Evgenya S Shelobolina, Maddalena V Coppi, Anton A Korenevsky, Laurie N DiDonato, Sara A Sullivan, Hiromi Konishi, Huifang Xu, Ching Leang, Jessica E Butler, Byoung-Chan Kim and Derek R Lovley. 2007. Importance of c-type cytochromes for U(VI) reduction by Geobacter sulfurreducens. BMC Microbiol 7:16.

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Gemma Reguera, Rachael B. Pollina, Julie S. Nicoll, and Derek R. Lovley. 2007. Possible nonconductive role of Geobacter sulfurreducens pilus nanowires in biofilm formation. J Bacteriol 189:2125-2127.

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Evgenya S. Shelobolina, Kelly P. Nevin, Jessie D. Blakeney-Hayward, Claudia V. Johnsen, Todd W. Plaia, Paul Krader, Trevor Woodard, Dawn E. Holmes, Catherine Gaw VanPraagh and Derek R. Lovley. 2007. Geobacter pickeringii sp. nov., Geobacter argillaceus sp. nov. and Pelosinus fermentans gen. nov., sp. nov., isolated from subsurface kaolin lenses. Int J Syst Evol Microbiol 57:126-135.

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Julia Krushkal, Bin Yan, Laurie N DiDonato, Marko Puljic, Kelly P Nevin, Trevor L Woodard, Ronald M Adkins, Barbara A Methé, Derek R Lovley. 2007. Genome-wide expression profiling in Geobacter sulfurreducens: identification of Fur and RpoS transcription regulatory sites in a rel Gsu mutant. Funct Integr Genomics 7:229-255.

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Bin Yan, Cinthia Núñez, Toshiyuki Ueki, Abraham Esteve-Núñez, Marko Puljic, Ronald M Adkins, Barbara A Methé, Derek R Lovley, Julia Krushkal. 2006. Computational prediction of RpoS and RpoD regulatory sites in Geobacter sulfurreducens using sequence and gene expression information. Gene 384:73-95.

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Gemma Reguera, Kelly P. Nevin, Julie S. Nicoll, Sean F. Covalla, Trevor L. Woodard, and Derek R. Lovley. 2006. Biofilm and nanowire production leads to increased current in Geobacter sulfurreducens fuel cells. Appl Environ Microbiol 72:7345-7348.

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Shelley A. Haveman, Dawn E. Holmes, Yan-Huai R. Ding, Joy E. Ward, Raymond J. DiDonato Jr., and Derek R. Lovley. 2006. c-type cytochromes in Pelobacter carbinolicus. Appl Environ Microbiol 72:6980-6985.

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Laurie N. DiDonato, Sara A. Sullivan, Barbara A. Methe´, Kelly P. Nevin, Reg England, and Derek R. Lovley. 2006. Role of Rel Gsu in stress response and Fe(III) reduction in Geobacter sulfurreducens. J Bacteriol 188:8469-8478.

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Dawn E Holmes, Swades K Chaudhuri, Kelly P Nevin, Teena Mehta, Barbara A Methé, Anna Liu, Joy E Ward, Trevor L Woodard, Jennifer Webster, Derek R Lovley. 2006. Microarray and genetic analysis of electron transfer electrodes in Geobacter sulfurreducens. Environ Microbiol 8:1805-1815.

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Teena Mehta, Susan E. Childers, Richard Glaven, Derek R. Lovley and Tünde Mester. 2006. A putative multicopper protein secreted by an atypical type II secretion system involved in the reduction of insoluble electron acceptors in Geobacter sulfurreducens. Microbiology 152:2257-2264.

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Derek R. Lovley. 2006. Microbial energizers: Fuel cells that keep on going. Microbe 1:323-329.

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Yan-Huai R. Ding, Kim K. Hixson, Carol S. Giometti, Ann Stanley, Abraham Esteve-Núñez, Tripti Khare, Sandra L. Tollaksen, Wenhong Zhu, Joshua N. Adkins, Mary S. Lipton, Richard D. Smith, Tünde Mester, Derek R. Lovley. 2006. The proteome of dissimilatory metal-reducing microorganism Geobacter sulfurreducens under various growth conditions. Biochim Biophys Acta 1764:1198-1206.

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Derek R. Lovley. 2006. Taming electricigens: How electricity-generating microbes can keep going, and going — faster. The Scientist 7:46.

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Derek R. Lovley. 2006. Bug juice: Harvesting electricity with microorganisms. Nature Reviews Microbiology 4:497-508.

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Derek R. Lovley. 2006. Microbial fuel cells: Novel microbial physiologies and engineering approaches. Current Opinion in Biotechnology 17:327-332.

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Cinthia Núñez, Abraham Esteve-Núñez, Carol Giometti, Sandra Tollaksen, Tripti Khare, Winston Lin, Derek R. Lovley, and Barbara A. Methé. 2006. DNA microarray and proteomic analyses of the RpoS regulon in Geobacter sulfurreducens. J Bacteriol 188:2792-2800.

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Byoung-Chan Kim, Xinlei Qian, Ching Leang, Maddalena V. Coppi,, and Derek R. Lovley. 2006. Two putative c-type multiheme cytochromes required for the expression of OmcB, an outer membrane protein essential for optimal Fe(III) reduction in Geobacter sulfurreducens. J Bacteriol 188:3138-3142.

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Daniel A. Lowy, Leonard M. Tender, J. Gregory Zeikus, Doo Hyun Park and Derek R. Lovley. 2006. Harvesting energy from the marine sediment-water interface II: Kinetic activity of anode materials. Biosens Bioelectron 21:2058-2063.

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Radhakrishnan Mahadevan, Daniel R. Bond, Jessica E. Butler, Abraham Esteve-Núñez, Maddalena V Coppi, Bernhard O. Palsson, Christopher H. Schilling, Derek R. Lovley. 2006. Characterization of metabolism in the Fe(III)-reducing organism Geobacter sulfurreducens by constraint-based modeling. Appl Environ Microbiol 72:1558-1568.

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Jessica E. Butler, Richard H. Glaven, Abraham Esteve-Núñez, Cinthia Núñez, Evgenya S. Shelobolina, Daniel R. Bond, and Derek R. Lovley. 2006. Genetic characterization of a single bifunctional enzyme for fumarate reduction and succinate oxidation in Geobacter sulfurreducens and engineering of fumarate reduction in Geobacter metallireducens. J Bacteriol 188:450-455.

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Tripti Khare, Abraham Esteve-Núñez, Kelly P. Nevin, Wenhong Zhu, John R. Yates III, Derek Lovley and Carol S. Giometti. 2005. Differential protein expression in the metal-reducing bacterium Geobacter sulfurreducens strain PCA grown with fumarate or ferric citrate. Proteomics 6:632-640.

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Teena Mehta, Maddalena V. Coppi, Susan E. Childers, and Derek R. Lovley. 2005. Outer membrane c-type cytochromes required for Fe(III) and Mn(IV) oxide reduction in Geobacter sulfurreducens. Appl Environ Microbiol 71:8634-8641.

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Yun-Juan Chang, Philip E. Long, Roland Geyer, Aaron D. Peacock, Charles T. Resch, Kerry Sublette, Susan Pfiffner, Amanda Smithgall, Robert T. Anderson, Helen A. Vrionis, John R. Stephen, Richard Dayvault, Irene Ortiz-Bernad, Derek R. Lovley, and David C. White. 2005. Microbial incorporation of 13C-labeled acetate at the field scale: detection of microbes responsible for reduction of U(VI). Environ Sci Technol 39:9039-9048.

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Kelvin B. Gregory and Derek R. Lovley. 2005. Remediation and recovery of uranium from contaminated subsurface environments with electrodes. Environ Sci Technol 39:8943-8947.

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Dawn E. Holmes, Kelly P. Nevin, Regina A. O'Neil, Joy E. Ward, Lorrie A. Adams, Trevor L. Woodard, Helen A. Vrionis,, and Derek R. Lovley. 2005. Potential for quantifying expression of the Geobacteraceae citrate synthase gene to assess the activity of Geobacteraceae in the subsurface and on current-harvesting electrodes. Appl Environ Microbiol 71:6870-6877.

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Evgenya S. Shelobolina, Sam M. Pickering, Jr and Derek R. Lovley. 2005. Fe-cycle bacteria from industrial clays mined in Georgia, USA. Clays and Clay Minerals 6:580-586.

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Helen A. Vrionis, Robert T. Anderson, Irene Ortiz-Bernad, Kathleen R. O'Neill, Charles T. Resch, Aaron D. Peacock, Richard Dayvault, David C. White, Philip E. Long, and Derek R. Lovley. 2005. Microbiological and geochemical heterogeneity in an in situ uranium bioremediation field site. Appl Environ Microbiol 71:6308-6318.

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Derek R. Lovley. 2005. Crystal ball. In silico biology meets in situ phenomenology. Environ Microbiol 7:478-479.

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Ching Leang, Lorrie A. Adams, Kuk-Jeong Chin, Kelly P. Nevin, Barbara A. Methé, Jennifer Webster, Manju L. Sharma, and Derek R. Lovley. 2005. Adaptation to disruption of the electron transfer pathway for Fe(III) reduction in Geobacter sulfurreducens. J Bacteriol 187:5918-5926.

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Daniel R. Bond, Tünde Mester, Camilla L. Nesbø, Andrea V. Izquierdo-Lopez, Frank L. Collart, and Derek R. Lovley. 2005. Characterization of citrate synthase from Geobacter sulfurreducens and evidence for a family of citrate synthases similar to those of eukaryotes throughout the Geobacteraceae. Appl Environ Microbiol 71:3858-3865.

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Kelly P. Nevin, Dawn E. Holmes, Trevor L. Woodard, Erich S. Hinlein, David W. Ostendorf and Derek R. Lovley. 2005. Geobacter bemidjiensis sp. nov. and Geobacter psychrophilus sp. nov., two novel Fe(III)-reducing subsurface isolates. Int J Syst Evol Microbiol 55:1667-1674.

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Eman Afkar, Gemma Reguera, Marianne Schiffer, Derek R. Lovley. 2005. A novel Geobacteraceae-specific outer membrane protein J (OmpJ) is essential for electron transport to Fe (III) and Mn (IV) oxides in Geobacter sulfurreducens. BMC Microbiol 5:41.

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Ching Leang and Derek R. Lovley. 2005. Regulation of two highly similar genes, omcB and omcC, in a 10 kb chromosomal duplication in Geobacter sulfurreducens. Microbiology 151:1761-1767.

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Byoung-Chan Kim, Ching Leang, Yan-Huai R. Ding, Richard H. Glaven, Maddalena V. Coppi,, and Derek R. Lovley. 2005. OmcF, a putative c-type monoheme outer membrane cytochrome required for the expression of other outer membrane cytochromes in Geobacter sulfurreducens. J Bacteriol 187:4505-4513.

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Gemma Reguera, Kevin D. McCarthy, Teena Mehta, Julie S. Nicoll, Mark T. Tuominen and Derek R. Lovley. 2005. Extracellular electron transfer via microbial nanowires. Nature 435:1098-1101.

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Barbara A. Methé, Jennifer Webster, Kelly P. Nevin, Jessica E. Butler, and Derek R. Lovley. 2005. DNA microarray analysis of nitrogen fixation and Fe(III) reduction in Geobacter sulfurreducens. Appl Environ Microbiol 71:2530-2538.

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Daniel R. Bond, and Derek R. Lovley. 2005. Evidence for involvement of an electron shuttle in electricity generation by Geothrix fermentans. Appl Environ Microbiol 71:2186-2189.

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Maddalena V. Coppi. 2005. The hydrogenases of Geobacter sulfurreducens: A comparative genomic perspective. Microbiology 151:1239-1254.

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Abraham Esteve-Núñez, Mary Rothermich, Manju Sharma and Derek Lovley. 2005. Growth of Geobacter sulfurreducens under nutrient-limiting conditions in continuous culture. Environ Microbiol 7(5):641-648.

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Evgeny Vinogradov, Anton Korenevsky, Derek R. Lovley and Terry J. Beveridge. 2004. The structure of the core region of the lipopolysaccharide from Geobacter sulfurreducens. Carbohydr Res. 339:2901-2904.

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Kazem Kashefi, Dawn E. Holmes, Derek R. Lovley, Jason M. Tor. 2008. Potential importance of dissimilatory Fe(III)-reducing microorganisms in hot sedimentary environments. The Subseafloor Biosphere at Mid-Ocean Ridges, Geophysical Monograph Series 74:251-258.

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Derek R. Lovley. 2004. Potential role of dissimilatory iron reduction in the early evolution of microbial respiration. In J. Seckbach (ed.), Origins, Evolution and Biodiversity of Microbial Life. Kluwer, Netherlands. pp. 301-313.

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Dawn E. Holmes, Kelly P. Nevin and Derek R. Lovley. 2004. Comparison of 16S rRNA, nifD, recA, gyrB, rpoB and fusA genes within the family Geobacteraceae fam. nov. Int J Syst Evol Microbiol 54:1591-1599.

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Dawn E. Holmes, Kelly P. Nevin,, and Derek R. Lovley. 2004. In situ expression of nifD in Geobacteraceae in subsurface sediments. Appl Environ Microbiol 70:7251-7259.

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Irene Ortiz-Bernad, Robert T. Anderson, Helen A. Vrionis, Derek R. Lovley. 2004. Resistance of solid-phase U(VI) to microbial reduction during in situ bioremediation of uranium-contaminated groundwater. Appl Environ Microbiol 70:7558-7560.

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Dawn E. Holmes. 2004. Microbial communities associated with electrodes harvesting electricity from a variety of aquatic sediments. Microb Ecol 48:178-190.

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Kazem Kashefi. 2004. Response to Cowan: The upper temperature for life - where do we draw the line?. Trends Microbiol 12:58-60.

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Dawn E. Holmes, Julie S. Nicoll, Daniel R. Bond, and Derek R. Lovley. 2004. Potential role of a novel psychrotolerant member of the family Geobacteraceae, Geopsychrobacter electrodiphilus gen. nov., sp. nov., in electricity production by a marine sediment fuel cell. Appl Environ Microbiol 70:6023-6030.

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Derek R. Lovley, Dawn E. Holmes, Kelly P. Nevin. 2004. Dissimilatory Fe(III) and Mn(IV) reduction. Advances in Microbial Physiology 49:219-86.

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Cinthia Núñez, Lorrie Adams, Susan Childers, Derek R. Lovley. 2004. The RpoS sigma factor in the dissimilatory Fe(III)-reducing bacterium Geobacter sulfurreducens. J Bacteriol 186:5543-5546.

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Kuk-Jeong Chin, Abraham Esteve-Núñez, Ching Leang, and Derek R. Lovley. 2004. Direct correlation between rates of anaerobic respiration and levels of mRNA for key respiratory genes in Geobacter sulfurreducens. Appl Environ Microbiol 70:5183-5189.

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Dawn E. Holmes, Daniel R. Bond, Derek R. Lovley. 2004. Electron transfer by Desulfobulbus propionicus to Fe(III) and graphite electrodes. Appl Environ Microbiol 70:1234-1237.

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Abraham Esteve-Núñez, Cinthia Núñez, and Derek R. Lovley. 2004. Preferential reduction of Fe(III) over fumarate by Geobacter sulfurreducens. J Bacteriol 186:2897-2899.

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Evgenya S. Shelobolina, Robert T. Anderson, Yury N. Vodyanitskii,
Anatolii V. Sivtsov, Richard Yuretich, Derek R. Lovley. 2004. Importance of clay size minerals for Fe(III) respiration in a petroleum-contaminated aquifer. Geobiology 2:67-76.

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Maddalena V. Coppi, Regina A. O'Neil, and Derek R. Lovley. 2004. Identification of an uptake hydrogenase required for hydrogen-dependent reduction of Fe(III) and other electron acceptors by Geobacter sulfurreducens. J Bacteriol 186:3022-3028.

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W. C. Lin, Maddalena V. Coppi, and Derek R. Lovley. 2004. Geobacter sulfurreducens can grow with oxygen as a terminal electron acceptor. Appl Environ Microbiol 70:2525-2528.

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Irene Ortiz-Bernad, Robert T. Anderson, Helen A. Vrionis, and Derek R. Lovley. 2004. Vanadium respiration by Geobacter metallireducens: novel strategy for in situ removal of vanadium from groundwater. Appl Environ Microbiol 70:3091-3095.

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Evgenya S. Shelobolina, Sara A. Sullivan, Kathleen R. O'Neill, Kelly P. Nevin, and Derek R. Lovley. 2004. Isolation, characterization, and U(VI)-reducing potential of a facultatively anaerobic, acid-resistant bacterium from low-pH, nitrate- and U(VI)-contaminated subsurface sediment and description of Salmonella subterranea sp. nov. Appl Environ Microbiol 70:2959-2965.

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Kelvin B. Gregory, Daniel R. Bond, Derek R. Lovley. 2004. Graphite electrodes as electron donors for anaerobic respiration. Environ Microbiol 6:596-604.

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Jessica E. Butler, Franz Kaufmann, Maddalena V. Coppi, Cinthia Núñez, and Derek R. Lovley. 2004. MacA, a diheme c-type cytochrome involved in Fe(III) reduction by Geobacter sulfurreducens. J Bacteriol 186:4042-4045.

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Bin Yan, Barbara A. Methé, Derek R. Lovley, and Julia Krushkal. 2004. Computational prediction of conserved operons and phylogenetic footprinting of transcription regulatory elements in the metal-reducing bacterial family Geobacteraceae. J Theor Biol. 230:133-44.

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Evgenya S. Shelobolina, Catherine Gaw Van Praagh, Derek R. Lovley. 2003. Use of ferric and ferrous iron containing minerals for respiration by Desulfitobacterium frappieri. Geomicrobiol J 20:143-156.

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Chuanlun L. Zhang, Yiliang Lia, Qi Ye, Jon Fong, Aaron D. Peacock, Elizabeth Blunt, Jiasong Fang, Derek R. Lovley and David C. White. 2003. Carbon isotope signatures of fatty acids in Geobacter metallireducens and Shewanella algae. Chemical Geology 195:17-28.

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Jonathan R. Lloyd, Derek R. Lovley, Lynne E. Macaskie. 2003. Biotechnological application of metal-reducing microorganisms. Adv Appl Microbiol 53:85-128.

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Jon R. Lloyd, Ching Leang, Allison L. Hodges Myerson, Maddalena V. Coppi, Stacey Cuifo, Barb Methe, Steven J. Sandler, and Derek R. Lovley. 2003. Biochemical and genetic characterization of PpcA, a periplasmic c-type cytochrome in Geobacter sulfurreducens. Biochem J 369:153-161.

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Ching Leang, Maddalena V. Coppi, and Derek R. Lovley. 2003. OmcB, a c-type polyheme cytochrome, involved in Fe(III) reduction in Geobacter sulfurreducens. J Bacteriol 185:2096-2103.

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Kazem Kashefi, Dawn E. Holmes, John A. Baross, and Derek R. Lovley. 2003. Thermophily in the Geobacteraceae: Geothermobacter ehrlichii gen. nov., sp. nov., a novel thermophilic member of the Geobacteraceae from the "Bag City" hydrothermal vent. Appl Environ Microbiol 69:2985-2993.

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Mónica Jara, Cinthia Núñuz, Susana Campoy, Antonio R. Fernández de Henestrosa, Derek R. Lovley, and Jordi Barbé. 2003. Geobacter sulfurreducens has two autoregulated lexA genes whose products do not bind the recA promoter: differing responses of lexA and recA to DNA damage. J Bacteriol 185:2493-2502.

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Kelly P. Nevin, Kevin T. Finneran, and Derek R. Lovley. 2003. Microorganisms associated with uranium bioremediation in a high-salinity subsurface sediment. Appl Environ Microbiol 69:3672-3675.

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Kevin T. Finneran, Claudia V. Johnsen and Derek R. Lovley. 2003. Rhodoferax ferrireducens sp. nov., a psychrotolerant, facultatively anaerobic bacterium that oxidizes acetate with the reduction of Fe(III). Int J Syst Evol Microbiol 53:669-673.

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Jason M. Tor, Jan P. Amend, Derek R. Lovley. 2003. Metabolism of organic compounds in anaerobic, hydrothermal sulphate-reducing marine sediments. Environ Microbiol 5:583-591.

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Kazem Kashefi and Derek R. Lovley. 2003. Extending the upper temperature limit for life. Science 301:934.

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Robert T. Anderson, Helen A. Vrionis, Irene Ortiz-Bernad, Charles T. Resch, Philip E. Long, Richard Dayvault, Ken Karp, Sam Marutzky, Donald R. Metzler, Aaron Peacock, David C. White, Mary Lowe, and Derek R. Lovley. 2003. Stimulating the in situ activity of Geobacter species to remove uranium from the groundwater of a uranium-contaminated aquifer. Appl Environ Microbiol 69:5884-5891.

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Barbara Methé, Karen E. Nelson, Jonathan A. Eisen, Ian T. Paulsen, Wiliam Nelson, John F. Heidelberg, Dongying Wu, Martin Wu, Naomi Ward, Maureen J. Beanan, Robert J. Dodson, Ramana Madupu, Lauren M. Brinkac, Sean C. Daugherty, Robert T. DeBoy, A. Scott Durkin, Michelle Gwinn, James F. Kolonay, Steven A. Sullivan, Daniel H. Haft, Jeremy Selengut, Tanja M. Davidsen, Nikhat Zafar, Owen White, Bryant Tran, Cristina Romero, Heather A. Forberger, Janette Weidman, Hoda Khouri, Tamara V. Feldblyum, Terrry R. Utterback, Susan E. Van Aken, Derek R. Lovley, and Christopher M. Fraser. 2003. Genome of Geobacter sulfurreducens: metal reduction in subsurface environments. Science 302:1967.

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Swades K. Chaudhuri and Derel R. Lovley. 2003. Electricity generation by direct oxidation of glucose in mediatorless microbial fuel cells. Nature Biotechnology 21:1229-1232.

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Derek R. Lovley. 2003. Cleaning up with genomics: Applying molecular biology to bioremediation. Nature Reviews Microbiology 1:36-44.

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David E. Cummings, Oona L. Snoeyenbos-West, Deborah T. Newby, Allison M. Niggemyer, Derek R. Lovley, Laura A. Achenbach, and R. Frank Rosenzweig. 2003. Diversity of Geobacteraceae species inhabiting metal-polluted freshwater lake sediments ascertained by 16S rDNA analyses. Microb Ecol 46:257-269.

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Evgenya S. Shelobolina, Kathleen O'Neill, Kevin T. Finneran, Lory A. Hayes, and Derek R. Lovley. 2003. Potential for in situ bioremediation of a low-pH, high-nitrate uranium-contaminated groundwater. Soil and Sediment Contamination 12:865-884.

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Daniel R. Bond, and Derek R. Lovley. 2003. Electricity production by Geobacter sulfurreducens attached to electrodes. Appl Environ Microbiol 69:1548-1555.

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Derek R. Lovley. 2002. Dissimilatory metal reduction: From early life to bioremediation. ASM News 68:231-237.

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Kelly P. Nevin and Derek R. Lovley. 2002. Mechanisms for Fe(III) oxide reduction in sedimentary environments. Geomicrobiol J 19:141-159.

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Kevin T. Finneran, Robert T. Anderson, Kelly P. Nevin, and Derek R. Lovley. 2002. Potential for bioremediation of uranium-contaminated aquifers with microbial U(VI) reduction. Soil and Sediment Contamination 11:339-357.

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Francis H. Chapelle, Kathleen O'Neill, Paul M. Bradley, Barbara A. Methé, Stacy A. Ciufo, LeRoy L. Knobel & Derek R. Lovley. 2002. A hydrogen-based subsurface microbial community dominated by methanogens. Nature 415:312-315.

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Daniel R. Bond, Dawn E. Holmes, Leonard M. Tender and Derek R. Lovley. 2002. Electrode-reducing microorganisms that harvest energy from marine sediments. Science 295:483-485.

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Kazem Kashefi, Dawn E. Holmes, Anna-Louise Reysenbach, and Derek R. Lovley. 2002. Use of Fe(III) as an electron acceptor to recover previously uncultured hyperthermophiles: isolation and characterization of Geothermobacterium ferrireducens gen. nov., sp. nov. Appl Environ Microbiol 68:1735-1742.

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Susan E. Childers, Stacy Ciufo, Derek R. Lovley. 2002. Geobacter metallireducens accesses insoluble Fe(III) oxide by chemotaxis. Nature 416:767-769.

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Daniel R. Bond, and Derek R. Lovley. 2002. Reduction of Fe(III) oxide by methanogens in the presence and absence of extracellular quinones. Environ Microbiol 4:115-124.

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Kelly P. Nevin and Derek R. Lovley. 2002. Mechanisms for accessing insoluble Fe(III) oxide during dissimilatory Fe(III) reduction by Geothrix fermentans. Appl Environ Microbiol 68:2294-2299.

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Dawn E. Holmes, Kevin T. Finneran, Regina A. O'Neil, and Derek R. Lovley. 2002. Enrichment of members of the family Geobacteraceae associated with stimulation of dissimilatory metal reduction in uranium-contaminated aquifer sediments. Appl Environ Microbiol 68:2300-2306.

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Lory A. Hayes, and Derek R. Lovley. 2002. Specific 16S rDNA sequences associated with naphthalene degradation under sulfate-reducing conditions in harbor sediments. Microb Ecol 43:134-145.

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Kazem Kashefi, Jason M Tor, Dawn E Holmes, Catherine V Gaw Van Praagh, Anna-Louise Reysenbach, Derek R Lovley. 2002. Geoglobus ahangari gen. nov., sp. nov., a novel hyperthermophilic archaeon capable of oxidizing organic acids and growing autotrophically on hydrogen with Fe(III) serving as the sole electron acceptor. Int J Syst Evol Microbiol 52:719-728.

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Leonard M. Tender, Clare E. Reimers, Hilmar A. Stecher, III, Dawn E. Holmes, Daniel R. Bond, Daniel A. Lowy, Kanoelani Pilobello, Stephanie J. Fertig & Derek R. Lovley. 2002. Harnessing microbially generated power on the seafloor. Nat Biotechnol 20:821-825.

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Francis H. Chapelle, Paul M. Bradley, Derek R. Lovley, Kathleen O'Neill, and James Landmeyer. 2002. Rapid evolution of redox processes in a petroleum hydrocarbon-contaminated aquifer. Ground Water 40:353-360.

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Robert T. Anderson and Derek R. Lovley. 2002. Chapter 7: Microbial redox interactions with uranium: an environmental perspective. Interactions of Microorganisms with Radionuclides pp. 205-223.

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Lisa Klapper, Diane M. McKnight, J. Robin Fulton, Elizabeth L. Blunt-Harris, Kelly P. Nevin, Derek R. Lovley, and Patrick G. Hatcher. 2002. Fulvic acid oxidation state detection using fluorescence spectroscopy. Environ Sci Technol 36:3170-3175.

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Kevin T. Finneran, Meghan E. Housewright and Derek R. Lovley. 2002. Multiple influences of nitrate on uranium solubility during bioremediation of uranium-contaminated subsurface sediments. Environ Microbiol 4:510-516.

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Kevin T Finneran, Heather M Forbush, Catherine V Gaw VanPraagh and Derek R Lovley. 2002. Desulfitobacterium metallireducens sp. nov., an anaerobic bacterium that couples growth to the reduction of metals and humic acids as well as chlorinated compounds. Int J Syst Evol Microbiol 52:1929-1935.

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Mary M. Rothermich, Lory A. Hayes, and Derek R. Lovley. 2002. Anaerobic, sulfate-dependent degradation of polycyclic aromatic hydrocarbons in petroleum-contaminated harbor sediment. Environ Sci Technol 36:4811-4817.

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Jon R. Lloyd, J. Chesnes, Susan Glasauer, D.J. Bunker, F.R. Livens, and Derek R. Lovley. 2002. Reduction of actinides and fission products by Fe(III)-reducing bacteria. Geomicrobiol J 19:103-120.

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Derek R. Lovley. 2002. Analysis of the genetic potential and gene expression of microbial communities involved in the in situ bioremediation of uranium and harvesting electrical energy from organic matter. OMICS 6:331-339.

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Chuanlun L. Zhang, Juske Horita, David R. Cole, Jizhong Zhou, Derek R. Lovley and Tommy J. Phelps. 2001. Temperature-dependent oxygen and carbon isotope fractionations of biogenic siderite. Geochimica et Cosmochimica Acta 14:2257-2271

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Kevin T. Finneran, Derek R. Lovley, and Ellen Moyer. 2001. Anaerobic strategies for enhanced MTBE and TBA bioremediation. Contaminated Soil, Sediment, & Water Spring:91-94.

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Derek R. Lovley. 2001. Chapter 7: Reduction of iron and humics in subsurface environments. In Subsurface Microbiology and Biogeochemistry pp. 193-217.

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Diane M. McKnight, Durelle T. Scott, Duane C. Hrncir, and Derek R. Lovley. 2001. Chapter 18: Photochemical and microbial processes influencing iron-humic interactions in stream and lake sediments. Humic Substances and Chemical Contaminants pp. 351-69.

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Jason M. Tor, Kazem Kashefi, and Derek R. Lovley. 2001. Acetate oxidation coupled to Fe(III) reduction in hyperthermophilic microorganisms. Appl Environ Microbiol 67:1363-1365.

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Oona Snoeyenbos-West, Catherine G. Van Praagh, and Derek R. Lovley. 2001. Trichlorobacter thiogenes should be renamed as a Geobacter species. Appl Environ Microbiol 67:1020-1022.

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Susan E. Childers, and Derek R. Lovley. 2001. Differences in Fe(III) reduction in the hyperthermophilic archaeon, Pyrobaculum islandicum, versus mesophilic Fe(III)-reducing bacteria. FEMS Microbiol Lett 195:253-258.

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John D. Coates, Vishvesh K. Bhupathiraju, Laurie A. Achenbach, Michael J. McInerney, and Derek R. Lovley. 2001. Geobacter hydrogenophilus, Geobacter chapellei and Geobacter grbiciae, three new, strictly anaerobic, dissimilatory Fe(III)-reducers. Int J Syst Evol Microbiol 51:581-588.

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Robert T. Anderson, Francis H. Chapelle, and Derek R. Lovley. 2001. Comment on "Abiotic controls on H 2 production from basalt--water reactions and implications for aquifer biogeochemistry". Environ Sci Technol 35:1556-1559.

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Kevin T. Finneran, and Derek R. Lovley. 2001. Anaerobic degradation of methyl tert-butyl ether (MTBE) and tert-butyl alcohol (TBA). Environ Sci Technol 35:1785-1790.

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Jason M. Tor, and Derek R. Lovley. 2001. Anaerobic degradation of aromatic compounds coupled to Fe(III) reduction by Ferroglobus placidus. Environ Microbiol 3:281-287.

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Jennie R. Stults, Oona Snoeyenbos-West, Barbara Methé, Derek R. Lovley, and Darrell P. Chandler. 2001. Application of the 5' fluorogenic exonuclease assay (TaqMan) for quantitative ribosomal DNA and rRNA analysis in sediments. Appl Environ Microbiol 67:2781-2789.

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Jon R. Lloyd, and Derek R. Lovley. 2001. Microbial detoxification of metals and radionuclides. Curr Opin Biotechnol 12:248-253.

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Maddalena V. Coppi, Ching Leang, Steven J. Sandler, and Derek R. Lovley. 2001. Development of a genetic system for Geobacter sulfurreducens. Appl Environ Microbiol 67:3180-3187.

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Kazem Kashefi, Jason M. Tor, Kelly P. Nevin, and Derek R. Lovley. 2001. Reductive precipitation of gold by dissimilatory Fe(III)-reducing bacteria and archaea. Appl Environ Microbiol 67:3275-3279.

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Franz Kaufmann, and Derek R. Lovley. 2001. Isolation and characterization of a soluble NADPH-dependent Fe(III) reductase from Geobacter sulfurreducens. J Bacteriol 183:4468-4476.

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Derek R. Lovley. 2001. Anaerobes to the rescue. Science 293:1444-1446.

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Timothy S. Magnuson, Naohito Isoyama, Allison L. Hodges-Myerson, Gerard Davidson, Michael J. Maroney, Gill G. Geesey and Derek R. Lovley. 2001. Isolation, characterization and gene sequence analysis of a membrane-associated 89 kDa Fe(III)-reducing cytochrome c from Geobacter sulfurreducens. Biochem J 359:147-152.

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Derek R. Lovley. 2000. Dissimilatory Fe(III) and Mn(IV)-reducing prokaryotes. In M. Dworkin, S. Falkow, E. Rosenberg, K. Schleifer, and E. Stackebrandt (ed.), The prokaryotes, Springer-Verlag, New York, N.Y. 3:635-658.

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Derek R. Lovley. 2000. Chapter 1: Fe(III) and Mn(IV) reduction. In Environmental Microbe-Metal Interactions pp. 3-30.

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Derek R. Lovley, Kazem Kashefi, Madelline Vargas, Jason M. Tor and Elizabeth L. Blunt-Harris. 2000. Reduction of humic substances and Fe(III) by hyperthermophilic microorganisms. Chem Geol 169:289-298.

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Derek R. Lovley, and Robert T. Anderson. 2000. Influence of dissimilatory metal reduction on fate of organic and metal contaminants in the subsurface. Hydrogeol J 8:77-88.

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Robert T. Anderson, and Derek R. Lovley. 2000. Anaerobic bioremediation of benzene under sulfate-reducing conditions in a petroleum-contaminated aquifer. Environ Sci Technol 34:2261-2266.

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Kelly P. Nevin, and Derek R. Lovley. 2000. Potential for nonenzymatic reduction of Fe(III) via electron shuttling in subsurface sediments. Environ Sci Technol 34:2472-2478.

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Dennis A. Bazylinski, Annete J. Dean, Dirk Schuler, Elizabeth J.P. Phillips, and Derek R. Lovley. 2000. N 2 -dependent growth and nitrogenase activity in the metal-metabolizing bacteria, Geobacter and Magnetospirillum species. Environ Microbiol 2:266-273.

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Jon R. Lloyd, V.A. Sole, Catherine V. Van Praagh, and Derek R. Lovley. 2000. Direct and Fe(II)-mediated reduction of technetium by Fe(III)-reducing bacteria. Appl Environ Microbiol 66:3743-3749.

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Kazem Kashefi, and Derek R. Lovley. 2000. Reduction of Fe(III), Mn(IV), and toxic metals at 100 degrees C by Pyrobaculum islandicum. Appl Environ Microbiol 66:1050-1056.

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Timothy S Magnuson, Allison L. Hodges-Myerson, Derek R Lovley. 2000. Characterization of a membrane-bound NADH-dependent Fe 3+ reductase from the dissimilatory Fe 3+ reducing bacterium Geobacter sulfurreducens. FEMS Microbiol Lett 185:205-211.

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Robert T. Anderson, and Derek R. Lovley. 2000. Hexadecane decay by methanogenesis. Nature 404:722-723.

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Oona L. Snoeyenbos-West, Kelly P. Nevin, Robert T. Anderson, and Derek R. Lovley. 2000. Enrichment of Geobacter species in response to stimulation of Fe(III) reduction in sandy aquifer sediments. Microb Ecol 39:153-167.

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Kelly P. Nevin, and Derek R. Lovley. 2000. Lack of production of electron-shuttling compounds or solubilization of Fe(III) during reduction of insoluble Fe(III) oxide by Geobacter metallireducens. Appl Environ Microbiol 66:2248-2251.

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Derek R. Lovley, and Jon R. Lloyd. 2000. Microbes with a mettle for bioremediation. Nat Biotechnol 18:600-601.

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Derek R. Lovley, and John D. Coates. 2000. Novel forms of anaerobic respiration of environmental relevance. Curr Opin Microbiol 3:252-256.

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Derek R. Lovley. 2000. Anaerobic benzene degradation. Biodegradation 11:107-116.

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Derek R. Lovley, Jocelyn L. Fraga, John D. Coates, and Elizabeth L. Blunt-Harris. 1999. Humics as an electron donor for anaerobic respiration. Environ Microbiol 1:89-98.

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Robert T. Anderson, and Derek R. Lovley. 1999. Naphthalene and benzene degradation under Fe(III)-reducing conditions in petroleum-contaminated aquifers. Bioremediation J 3:121-135.

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Lory A. Hayes, Kelly P. Nevin, and Derek R. Lovley. 1999. Role of prior exposure on anaerobic degradation of naphthalene and phenanthrene in marine harbor sediments. Org Geochem 30:937-945.

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Juliette Rooney-Varga, Robert T. Anderson, Jocelyn L. Fraga, David Ringelberg, and Derek R. Lovley. 1999. Microbial communities associated with anaerobic benzene degradation in a petroleum-contaminated aquifer. Appl Environ Microbiol 65:3056-3063.

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John F. Stolz, Debra J. Ellis, Jodi Switzer Blum, Dianne Ahmann, Derek R. Lovley, and Ronald S. Oremland. 1999. Sulfurospirillum barnesii sp. nov. and Sulfurospirillum arsenophilum sp. nov., new members of the Sulfurospirillum clade of the epsilon proteobacteria. Int J Syst Bacteriol 49 Pt 3:1177-1180.

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Derek R. Lovley, and Elizabeth L. Blunt-Harris. 1999. Role of humic-bound iron as an electron transfer agent in dissimilatory Fe(III) reduction. Appl Environ Microbiol 65:4252-4254.

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John D. Coates, Debra J. Ellis, Catherine V. Gaw, and Derek R. Lovley. 1999. Geothrix fermentans gen. nov., sp. nov., a novel Fe(III)-reducing bacterium from a hydrocarbon-contaminated aquifer. Int J Syst Bacteriol 49:1615-1622.

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Jon R. Lloyd, Elizabeth L. Blunt-Harris, and Derek R. Lovley. 1999. The periplasmic 9.6-kilodalton c-type cytochrome of Geobacter sulfurreducens is not an electron shuttle to Fe(III). J Bacteriol 181:7647-7649.

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John F. Stolz, Debra J. Ellis, Jodi Switzer Blum, Dianne Ahmann, Derek R. Lovley and Ronald S. Oremland. 1999. Sulfurospirillum barnesii sp nov and Sulfurospirillum arsenophilum sp nov., new members of the Sulfurospirillum clade of the epsilon Proteobacteria. International Journal Systems Bacteriology. 49:1177-1180.

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Coates, J.D., D.J. Ellis, C.V. Gaw and D.R. Lovley. 1999. Geothrix ferrnentans gen. nov., sp. nov., a novel Fe(l1l)-reducing bacterium from a hydrocarbon-contaminated aquifer. International Journal of Systematic Bacteriology. 49:1615-1622.

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Allan Treiman, Anika Wallendahl; Derek R. Lovley, Robert T. Anderson, and Francis H. Chapelle. 1998. Hydrogen chemistry of basalt aquifers. Science 5397:2194.

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Derek R. Lovley. 1998. Rock and the role of microbiology. Science 5360:54-55.

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Robert T. Anderson, Juliette N. Rooney-Varga, Catherine V. Gaw, and Derek R. Lovley. 1998. Anaerobic benzene oxidation in the Fe(III) reduction zone of petroleum-contaminated aquifers. Environ Sci Technol:1222-1229.

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Jonathan M. Weiner, Terry S. Lauck, and Derek R. Lovley. 1998. Enhanced anaerobic benzene degradation with the addition of sulfate. Bioremediation J 2:159-173.

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Derek R. Lovley, and Francis H. Chapelle. 1998. Chapter 9: A modeling approach to elucidating the distribution and rates of microbially catalyzed redox reactions in anoxic groundwater. pp. 197-209.

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Derek R. Lovley, Jocelyn L. Fraga, Elizabeth L. Blunt-Harris, L.A. Hayes, Elizabeth J.P. Phillips, and John D. Coates. 1998. Humic substances as a mediator for microbially catalyzed metal reduction. Acta Hydrochim Hydrobiol 26:152-157.

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John D. Coates, Terry Councell, Debra J. Ellis, and Derek R. Lovley. 1998. Carbohydrate oxidation coupled to Fe(III) reduction, a novel form of anaerobic metabolism. Anaerobe 4:277-282.

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Jonathan M. Weiner, and Derek R. Lovley. 1998. Anaerobic benzene degradation in petroleum-contaminated aquifer sediments after inoculation with a benzene-oxidizing enrichment. Appl Environ Microbiol 64:775-778.

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John D. Coates, Debra J. Ellis, Elizabeth L. Blunt-Harris, Catherine V. Gaw, Eric E. Roden, and D.R. Lovley. 1998. Recovery of humic-reducing bacteria from a diversity of environments. Appl Environ Microbiol 64:1504-1509.

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Jonathan M. Weiner, and Derek R. Lovley. 1998. Rapid benzene degradation in methanogenic sediments from a petroleum-contaminated aquifer. Appl Environ Microbiol 64:1937-1939.

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Ralf Cord-Ruwisch, Derek R. Lovley, and Bernhard Schink. 1998. Growth of Geobacter sulfurreducens with acetate in syntrophic cooperation with hydrogen-oxidizing anaerobic partners. Appl Environ Microbiol 64:2232-2236.

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Paul M. Bradley, Francis H. Chapelle, and Derek R. Lovley. 1998. Humic acids as electron acceptors for anaerobic microbial oxidation of vinyl chloride and dichloroethene. Appl Environ Microbiol 64:3102-3105.

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Robert T. Anderson, Francis H. Chapelle, and Derek R. Lovley. 1998. Evidence against hydrogen-based microbial ecosystems in basalt aquifers. Science 281:976-977.

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Robert S. Oremland, John Stolz, and Derek R. Lovley. 1998. "Green rust" in the lab and in the soil. Science 281:1111a.

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Madeline Vargas, Kazem Kashefi, Elizabeth L. Blunt-Harris, and Derek R. Lovley. 1998. Microbiological evidence for Fe(III) reduction on early Earth. Nature 395:65-67.

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Durelle T. Scott, Diane M. McKnight, Elizabeth L. Blunt-Harris, Sarah E. Kolesar, and Derek R. Lovley. 1998. Quinone moieties act as electron acceptors in the reduction of humic substances by humics-reducing microorganisms. Environ Sci Technol 32:2984-2989.

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Robert T. Anderson, Juliette N. Rooney-Varga, Catherine V. Gaw, and Derek R. Lovley. 1998. Anaerobic benzene oxidation in the Fe(III) reduction zone of petroleum contaminated aquifers. Environ. Sci. Technol. 32:1222–1229.

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Robert T. Anderson, and Derek R. Lovley. 1997. Ecology and biogeochemistry of in situ groundwater bioremediation. Adv Microb Ecol 15:289-350.

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Derek R. Lovley. 1997. Microbial Fe(III) reduction in subsurface environments. FEMS Microbiol Rev 20:305-313.

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Debra J. Lonergan, John D. Coates, and Derek R. Lovley. 1997. Diversity of electron donors and acceptors utilized by phylogenetically diverse iron-reducing bacteria. Progress in Microbial Ecology 1997:49-54.

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Derek R. Lovley, John D. Coates, D.A. Saffarini, and Debra J. Lonergan. 1997. Chapter 6: Dissimilatory iron reduction. Transition Metals in Microbial Metabolism pp. 187-215.

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Terry B. Councell, Edward R. Landa, and Derek R. Lovley. 1997. Microbial reduction of iodate. Water Air Soil Pollut 100:99-106.

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Derek R. Lovley, 1997. Potential for anaerobic bioremediation of BTEX in petroleum-contaminated aquifers. J Ind Microbiol Biotechnol 18:75-81.

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Junko Kazumi, Matthew E. Caldwell, Joseph M. Suflita, Derek R. Lovley, and Lily Y. Young. 1997. Anaerobic degradation of benzene in diverse anoxic environments. Environ Sci Technol 31:813-818.

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John D. Coates, Joan Woodward, Jon Allen, Paul Philp, and Derek R. Lovley. 1997. Anaerobic degradation of polycyclic aromatic hydrocarbons and alkanes in petroleum-contaminated marine harbor sediments. Appl Environ Microbiol 63:3589-3593.

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Francis H. Chapelle, Don A. Vroblesky, Joan C. Woodward, and Derek R. Lovley. 1997. Practical considerations for measuring hydrogen concentrations in groundwater. Environ Sci Technol 31:2873-2877.

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Dianne Ahmann, Lee R. Krumholz, Harold F. Hemond, Derek R. Lovley, and François M.M. Morel. 1997. Microbial mobilization of arsenic from sediments of the Aberjona watershed. Environ Sci Technol 31:2923-2930.

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Dianne K. Newman, Erin K. Kennedy, John D. Coates, Dianne Ahmann, Debra J. Ellis, Derek R. Lovley, and François M.M. Morel. 1997. Dissimilatory arsenate and sulfate reduction in Desulfotomaculum auripigmentum sp. nov. Arch Microbiol 168:380-388.

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Derek R. Lovley, and John D. Coates. 1997. Bioremediation of metal contamination. Curr Opin Biotechnol 8:285-289.

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Francis H. Chapelle, Paul M. Bradley, Derek R. Lovley, and Don A. Vroblesky. 1996. Measuring rates of biodegradation in a contaminated aquifer using field and laboratory methods. Ground Water 34:691–698.

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Derek R. Lovley, and Joan C. Woodward. 1996. Mechanisms for chelator stimulation of microbial Fe(III)-oxide reduction. Chemical Geology 132:19-24.

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John D. Coates, Richard T. Anderson, Joan C. Woodward, Elizabeth J.P. Phillips, and Derek R. Lovley. 1996. Anaerobic hydrocarbon degradation in petroleum-contaminated harbor sediments under sulfate-reducing and artificially imposed iron-reducing conditions. Environ Sci Technol 30:2784-2789.

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Derek R. Lovley, Joan C. Woodward, and Francis H. Chapelle. 1996. Rapid anaerobic benzene oxidation with a variety of chelated Fe(III) forms. Appl Environ Microbiol 62:288-291.

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Kathryn M. Kuivila, and Derek R. Lovley. 1996. Dissolved hydrogen concentrations in sulfate-reducing and methanogenic sediments. Mitt Internat Verein Limnol 25:55-62.

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John D. Coates, Robert T. Anderson, and Derek R. Lovley. 1996. Oxidation of polycyclic aromatic hydrocarbons under sulfate-reducing conditions. Appl Environ Microbiol 62:1099-1101.

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Debra J. Lonergan, Harry L. Jenter, John D. Coates, Elizabeth J.P. Phillips, Thomas M. Schmidt, and Derek R. Lovley. 1996. Phylogenetic analysis of dissimilatory Fe(III)-reducing bacteria. J Bacteriol 178:2402-2408.

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Derek R. Lovley, and Francis H. Chapelle. 1996. Hydrogen-based microbial ecosystems in the earth. Science 272:896-897.

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John D. Coates, Elizabeth J.P. Phillips, Debra J. Lonergan, Harry Jenter, and Derek R. Lovley. 1996. Isolation of Geobacter species from diverse sedimentary environments. Appl Environ Microbiol 62:1531-1536.

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Ronald S. Oremland, Debra J. Lonergan, Charles W. Culbertson, and D.R. Lovley. 1996. Microbial degradation of hydrochlorofluorocarbons (CHCl 2 F and CHCl 2 CF 3 ) in soils and sediments. Appl Environ Microbiol 62:1818-1821.

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Lovley, D.R., John D. Coates, Elizabeth L. Blunt-Harris, Elizabeth J.P. Phillips, and Joan C. Woodward. 1996. Humic substances as electron acceptors for microbial respiration. Nature (Letters) 382:445-447.

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Frank Caccavo Jr, John D. Coates, Ramon A. Rossello-Mora, Wolfgang Ludwig, Karl H. Schleifer, Derek R. Lovley, and Michael J. McInerney. 1996. Geovibrio ferrireducens, a phylogenetically distinct dissimilatory Fe(III)-reducing bacterium. Arch Microbiol 165:370-376.

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Derek R. Lovley. 1995. Microbial reduction of iron, manganese, and other metals. Advances in Agronomy 54:175-231.

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Derek R. Lovley. 1995. Bioremediation of organic and metal contaminants with dissimilatory metal reduction. J Ind Microbiol 14:85-93.

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Elizabeth J.P. Phillips, Edward R. Landa, and Derek R. Lovley. 1995. Remediation of uranium contaminated soils with bicarbonate extraction and microbial U(VI) reduction. J Ind Microbiol 14:203-207.

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Derek R. Lovley, John D. Coates, Joan C. Woodward, and Elizabeth J.P. Phillips. 1995. Benzene oxidation coupled to sulfate reduction. Appl Environ Microbiol 61:953-958.

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Derek R. Lovley, Elizabeth J.P. Phillips, Debra J. Lonergan, and Peggy K. Widman. 1995. Fe(III) and S 0 reduction by Pelobacter carbinolicus. Appl Environ Microbiol 61:2132-2138.

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Derek R. Lovley, and Francis H. Chapelle. 1995. Deep subsurface microbial processes. Rev Geophys 33:365-381.

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Anniet M. Laverman, Jodi S. Blum, Jeffra K. Schaefer, Elizabeth J.P. Phillips, Derek R. Lovley, and Ronald S. Oremland. 1995. Growth of strain SES-3 with arsenate and other diverse electron acceptors. Appl Environ Microbiol 61:3556-3561.

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John D. Coates, Debra J. Lonergan, Elizabeth J.P. Philips, Harry Jenter, and Derek R. Lovley. 1995. Desulfuromonas palmitatis sp. nov., a marine dissimilatory Fe(III) reducer that can oxidize long-chain fatty acids. Arch Microbiol 164:406-413.

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Derek R. Lovley, and Elizabeth J.P. Phillips. 1994. Reduction of chromate by Desulfovibrio vulgaris and its c 3 cytochrome. Appl Environ Microbiol 60:726-728.

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Derek R. Lovley, Francis H. Chapelle, and Joan C. Woodward. 1994. Use of dissolved H 2 concentrations to determine distribution of microbially catalyzed redox reactions in anoxic groundwater. Environ Sci Technol 28:1205-1210.

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Derek R. Lovley, and Elizabeth J.P. Phillips. 1994. Novel processes for anaerobic sulfate production from elemental sulfur by sulfate-reducing bacteria. Appl Environ Microbiol 60:2394-2399.

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Derek R. Lovley, Joan C. Woodward, and Francis H. Chapelle. 1994. Stimulated anoxic biodegradation of aromatic hydrocarbons using Fe(III) ligands. Nature 370:128-131.

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Frank Caccavo Jr, Debra J. Lonergan, Derek R. Lovley, Mark Davis, John F. Stolz, and Michael J. McInerney. 1994. Geobacter sulfurreducens sp. nov., a hydrogen- and acetate-oxidizing dissimilatory metal-reducing microorganism. Appl Environ Microbiol 60:3752-3759.

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Derek R. Lovley. 1993. Dissimilatory metal reduction. Annu Rev Microbiol 47:263-290.

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Derek R. Lovley. 1993. Dissimilatory reduction of iron and uranium. Trends in Microbial Ecology 47:71-74.

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Eric E. Roden, and Derek R. Lovley. 1993. Evaluation of 55 Fe as a tracer of Fe(III) reduction in aquatic sediments. Geomicrobiol J 11:49-56.

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Derek R. Lovley, Eric E. Roden, Elizabeth J.P. Phillips, and Joan C. Woodward. 1993. Enzymatic iron and uranium reduction by sulfate-reducing bacteria. Mar Geol 113:41-53.

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Max L. Coleman, David B. Hedrick, Derek R. Lovley, David C. White, and Kenneth Pye. 1993. Reduction of Fe(III) in sediments by sulphate-reducing bacteria. Nature (Letters) 361:436-438.

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Eric E. Roden, and Derek R. Lovley. 1993. Dissimilatory Fe(III) reduction by the marine microorganism Desulfuromonas acetoxidans. Appl Environ Microbiol 59:734-742.

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Derek R. Lovley. 1993. Anaerobes into heavy metal: Dissimilatory metal reduction in anoxic environments. Trends Ecol Evol 8:213-217.

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Elizabeth J.P. Phillips, Derek R. Lovley, and Eric E. Roden. 1993. Composition of non-microbially reducible Fe(III) in aquatic sediments. Appl Environ Microbiol 59:2727-2729.

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Lovley, D.R., Stephen J. Giovannoni, David C. White, James E. Champine, Elizabeth J.P. Phillips, Yuri A. Gorby, and Steve Goodwin. 1993. Geobacter metallireducens gen. nov. sp. nov., a microorganism capable of coupling the complete oxidation of organic compounds to the reduction of iron and other metals. Arch Microbiol 159:336-344.

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Derek R. Lovley, Peggy K. Widman, Joan C. Woodward, and Elizabeth J.P. Phillips. 1993. Reduction of uranium by cytochrome c 3 of Desulfovibrio vulgaris. Appl Environ Microbiol 59:3572-3576.

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Derek R. Lovley. 1993. Dissimilatory Metal Reduction. Annual Review of Microbiology. 47:263-290.

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Frank Caccavo Jr, Richard P. Blakemore, and Derek R. Lovley. 1992. A hydrogen-oxidizing, Fe(III)-reducing microorganism from the Great Bay Estuary, New Hampshire. Appl Environ Microbiol 58:3211-3216.

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Derek R. Lovley. 1992. Microbial oxidation of organic matter coupled to the reduction of Fe(III) and Mn(IV) oxides. Catena Suppl 21:101-114.

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Yuri A. Gorby, and Derek R. Lovley. 1992. Enzymatic uranium precipitation. Environ Sci Technol 26:205-207.

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Francis H. Chapelle, and Derek R. Lovley. 1992. Competitive exclusion of sulfate reduction by Fe(III)-reducing bacteria: A mechanism for producing discrete zones of high-iron ground water. Ground Water 30:29-36.

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Derek R. Lovley, and Elizabeth J.P. Phillips. 1992. Reduction of uranium by Desulfovibrio desulfuricans. Appl Environ Microbiol 58:850-856.

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Derek R. Lovley, and Joan C. Woodward. 1992. Consumption of freons CFC-11 and CFC-12 by anaerobic sediments and soils. Environ Sci Technol 26:925-929.

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Derek R. Lovley, Elizabeth J.P. Phillips, and Frank Caccavo Jr. 1992. Acetate oxidation by dissimilatory Fe(III) reducers. Appl Environ Microbiol 58:3205-3208.

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Derek R. Lovley, and Elizabeth J.P. Phillips. 1992. Bioremediation of uranium contamination with enzymatic uranium reduction. Environ Sci Technol 26:2228-2234.

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Derek R. Lovley, and Debra J. Lonergan. 1991. Chapter 18: Microbial oxidation of natural and antrhopogenic aromatic compounds coupled to Fe(III) reduction. Organic Substances and Sediments in Water 1:327-338.

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Yuri A. Gorby, and Derek R. Lovley. 1991. Electron transport in the dissimilatory iron reducer GS-15. Appl Environ Microbiol 57:867-870.

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Derek R. Lovley, Elizabeth J.P. Phillips, Yuri A. Gorby, and E.R. Landa. 1991. Microbial reduction of uranium. Nature 350:413-416.

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Derek R. Lovley, Elizabeth J.P. Phillips, and Debra J. Lonergan. 1991. Enzymatic versus nonenzymatic mechanisms for Fe(III) reduction in aquatic sediments. Environ Sci Technol 25:1062-1067.

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Derek R. Lovley. 1991. Dissimilatory Fe(III) and Mn(IV) reduction. Microbiol Rev 55:259-287.

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Edward R. Landa, Elizabeth J.P. Phillips, and Derek R. Lovley. 1991. Release of 226 Ra from uranium mill tailings by microbial Fe(III) reduction. Appl Geochem 6:647-652.

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Derek R. Lovley, Francis H. Chapelle, and Elizabeth J.P. Phillips. 1990. Fe(III)-reducing bacteria in deeply buried sediments of the Atlantic Coastal Plain. Geology 18:954-957.

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Derek R. Lovley. 1990. Magnetite formation during microbial dissimilatory iron reduction. Iron Biominerals 1990:151-166.

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Nicholas H.C. Sparks, Stephen Mann, Dennis A. Bazylinski, Derek R. Lovley, Holger W. Jannasch, and Richard B. Frankel. 1990. Structure and morphology of magnetite anaerobically-produced by a marine magnetotactic baterium and a dissimilatory iron-reducing bacterium. Earth Planet Sci Lett 98:14-22.

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Derek R. Lovley, and Debra J. Lonergan. 1990. Anaerobic oxidation of toluene, phenol, and p-cresol by the dissimilatory iron-reducing organism GS-15. Appl Environ Microbiol 56:1858-1864.

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Francis H. Chapelle, and Derek R. Lovley. 1990. Rates of microbial metabolism in deep coastal plain aquifers. Appl Environ Microbiol 56:1865-1874.

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John F. Stolz, Derek R. Lovley, and Stephen E. Haggerty. 1990. Biogenic Magnetite and the Magnetization of Sediments. Journal of Geophysical Research-Solid Earth and Planets. 95:4355-4361.

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Derek R. Lovley, and John F. Stolz. 1989. Origin of soil magnetite. Scientfic Correspondence, Nature:106.

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Derek R. Lovley, Elizabeth J. P. Phillips, and Debra J. Lonergan. 1989. Hydrogen and formate oxidation coupled to dissimilatory reduction of iron or manganese by Alteromonas putrefaciens. Appl Environ Microbiol 55:700-706.

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Derek R. Lovley, Mary Jo Baedecker, Debra J. Lonergan, Isabella M. Cozzarelli, Elizabeth J. P. Phillips, and Donald I. Siegel. 1989. Oxidation of aromatic contaminants coupled to microbial iron reduction. Nature 339:297-299.

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Bruce M. Moskowitz, Richard B. Frankel, Dennis A. Bazylinski, Holger W. Jannasch, and Derek R. Lovley. 1989. A comparison of magnetite particles produced anaerobically by magnetotactic and dissimilatory iron-reducing bacteria. Geophys Res Lett 16:665-668.

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Derek R. Lovley, and Elizabeth J.P. Phillips. 1989. Requirement for a microbial consortium to completely oxidize glucose in Fe(III)-reducing sediments. Appl Environ Microbiol 55:3234-3236.

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Derek R. Lovley, and Elizabeth J.P. Phillips. 1988. Novel mode of microbial energy metabolism: Organic carbon oxidation coupled to dissimilatory reduction of iron or manganese. Appl Environ Microbiol 54:1472-1480.

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Derek R. Lovley, and Elizabeth J.P. Phillips. 1988. Manganese inhibition of microbial iron reduction in anaerobic sediments. Geomicrobiol J 6:145-155.

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Derek R. Lovley, and Steve Goodwin. 1988. Hydrogen concentrations as an indicator of the predominant terminal electron-accepting reactions in aquatic sediments. Geochim Cosmochim Acta 52:2993-3003.

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Derek R. Lovley, and Elizabeth J.P. Phillips. 1987. Rapid assay for microbially reducible ferric iron in aquatic sediments. Appl Environ Microbiol:1536-1540.

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Elizabeth J.P. Phillips, and Derek R. Lovley. 1987. Determination of Fe(III) and Fe(II) in oxalate extracts of sediment. Soil Sci Soc Am J 51:938-941.

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Derek R. Lovley. 1987. Organic matter mineralization with the reduction of ferric iron: A review. Geomicrobiol J 5:375-399.

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Derek R. Lovley, and Elizabeth J.P. Phillips. 1987. Competitive mechanisms for inhibition of sulfate reduction and methane production in the zone of ferric iron reduction in sediments. Appl Environ Microbiol 53:2636-2641.

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Derek R. Lovley, John F. Stolz, Gordon L. Nord Jr, and Elizabeth J.P. Phillips. 1987. Anaerobic production of magnetite by a dissimilatory iron-reducing microorganism. Nature 330:252-254.

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Derek R. Lovley, and Michael J. Klug. 1986. Model for the distribution of sulfate reduction and methanogenesis in freshwater sediments. Geochim Cosmochim Acta 50:11-18.

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Derek R. Lovley, and Elizabeth J.P. Phillips. 1986. Organic matter mineralization with reduction of ferric iron in anaerobic sediments. Appl Environ Microbiol 51:683-689.

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Derek R. Lovley, and Elizabeth J.P. Phillips. 1986. Availability of ferric iron for microbial reduction in bottom sediments of the freshwater tidal Potomac River. Appl Environ Microbiol 52:751-757.

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Derek R. Lovley, and James G. Ferry. 1985. Production and consumption of H(2) during growth of Methanosarcina spp. on acetate. Appl Environ Microbiol 49:247-249.

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Derek R. Lovley. 1985. Minimum threshold for hydrogen metabolism in methanogenic bacteria. Appl Environ Microbiol 49:1530-1531.

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Derek R. Lovley, Richard C. Greening, and James G. Ferry. 1984. Rapidly growing rumen methanogenic organism that synthesizes coenzyme M and has a high affinity for formate. Appl Environ Microbiol 48:81-87.

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Derek R. Lovley, Robert H. White, and James G. Ferry. 1984. Identification of methyl coenzyme M as an intermediate in methanogenesis from acetate in Methanosarcina spp. J Bacteriol 160:521-525.

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Gary M. King, Michael J. Klug, and Derek R. Lovley. 1983. Metabolism of acetate, methanol, and methylated amines in intertidal sediments of Lowes Cove, Maine. Appl Environ Microbiol 45:1848-1853.

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Derek R. Lovley, and Michael J. Klug. 1983. Sulfate reducers can outcompete methanogens at freshwater sulfate concentrations. Appl Environ Microbiol 45:187-192.

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Derek R. Lovley, and Michael J. Klug. 1983. Methanogenesis from methanol and methylamines and acetogenesis from hydrogen and carbon dioxide in the sediments of a eutrophic lake. Appl Environ Microbiol 45:1310-1315.

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Derek R. Lovley, and Michael J. Klug. 1982. Intermediary metabolism of organic matter in the sediments of a eutrophic lake. Appl Environ Microbiol 43:552-560.

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Derek R. Lovley, Daryl F. Dwyer, and Michael J. Klug. 1982. Kinetic analysis of competition between sulfate reducers and methanogens for hydrogen in sediments. Appl Environ Microbiol 43:1373-1379.

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