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Publications
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Haveman, S.A., R.J. DiDonato, L. Villanueva, E.S. Shelobolina, B.L. Postier, B. Xu, A. Liu, and D.R. Lovley. 2008.
Genome-wide gene expression patterns and growth requirements suggest that Pelobacter carbinolicus reduces Fe(III) indirectly via sulfide production.
Appl Environ Microbiol 74(14):4277-84.
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Postier, B., R. DiDonato, K.P. Nevin, A. Liu, B. Frank, D. R. Lovley, and B.A. Methé. 2008.
Benefits of in-situ synthesized microarrays for analysis of gene expression in understudied microorganisms.
J Microbiol Methods 74(1):26-32.
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Kim, B.-C. , B.L. Postier, R.J. DiDonato, S.K. Chaudhuri, K.P. Nevin, and D.R. Lovley. 2008.
Insights into genes involved in electricity generation in Geobacter sulfurreducens via whole genome microarray analysis of the OmcF-deficient mutant.
Bioelectrochemistry 73(1):70–75.
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Krushkal, J., G. Reguera, M. Puljic, C. Leang , L.N. DiDonato, B. Yan, C. Núñez, J.F. Barbe, R. Mahadevan, B.A. Methé, R.M. Adkins, B. Postier, R.A. O'Neil, and D.R. Lovley. 2008.
Genome regions involved in multiple regulatory pathways identified using GSEL, a genome-wide database of regulatory sequence elements of Geobacter sulfurreducens.
International Conference on BioMedical Engineering and Informatics. pp. 424-431.
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Lovley, D.R. 2008.
Extracellular electron transfer: wires, capacitors, iron lungs, and more.
Geobiology 6(3):225-31.
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Lovley, D.R., and K.P. Nevin. 2008.
Chapter 23: Electricity production with electricigens.
In J. Wall et al. (ed.), Bioenergy. ASM Press, Washington, DC. pp. 295-306.
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O'Neil, R.A., D.E. Holmes, M.V. Coppi, L.A. Adams, M.J. Larrahondo, J.E. Ward, K.P. Nevin, T.L. Woodard, H.A. Vrionis, A.L. N'Guessan, and D.R. Lovley. 2008.
Gene transcript analysis of assimilatory iron limitation in Geobacteraceae during groundwater bioremediation.
Environ Microbiol 10(5):1218-30.
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Shelobolina, E.S., H.A. Vrionis, R.H. Findlay, and D.R. Lovley. 2008.
Geobacter uraniireducens sp. nov., isolated from subsurface sediment undergoing uranium bioremediation.
Int J Syst Evol Microbiol 58(Pt 5):1075-8.
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Holmes, D.E., T. Mester, R.A. O'Neil, L.A. Perpetua, M.J. Larrahondo, R. Glaven, M.L. Sharma, J.E. Ward, K.P. Nevin, and D.R. Lovley. 2008.
Genes for two multicopper proteins required for Fe(III) oxide reduction in Geobacter sulfurreducens have different expression patterns both in the subsurface and on energy-harvesting electrodes.
Microbiology(154):1422–35.
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Chin, K.J., M.L. Sharma, L.A. Russell, K.R. O'Neill, and D.R. Lovley. 2008.
Quantifying expression of a dissimilatory (bi)sulfite reductase gene in petroleum-contaminated marine harbor sediments.
Microb Ecol 55(3):489-99.
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Richter, H., K. McCarthy, K.P. Nevin, J.P. Johnson, V.M. Rotello, and D.R. Lovley. 2008.
Electricity generation by Geobacter sulfurreducens attached to gold electrodes.
Langmuir 24(8):4376-9.
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N'Guessan, A.L., H.A. Vrionis, C.T. Resch, P. Long, and D.R. Lovley. 2008.
Sustained removal of uranium from contaminated groundwater following stimulation of dissimilatory metal reduction.
Environ Sci Technol 42(8):2999–3004.
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Risso, C., S.J. Van Dien, A. Orloff, D.R. Lovley, and M.V. Coppi. 2008.
Elucidation of an alternate isoleucine biosynthesis pathway in Geobacter sulfurreducens.
J Bacteriol 190(7):2266-74.
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Segura, D., R. Mahadevan, K. Juárez, and D.R. Lovley. 2008.
Computational and experimental analysis of redundancy in the central metabolism of Geobacter sulfurreducens.
PLoS Comput Biol 4(2):e36.
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Lovley, D.R., R. Mahadevan, and K.P. Nevin. 2008.
Systems biology approach to bioremediation with extracellular electron transfer.
In E. Diaz (ed.), Microbial biodegradation, Genomics and molecular biology. Caister Academic Press, Norfolk, UK. pp. 71-96.
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Juárez, K., B.C. Kim, K. Nevin, L. Olvera, G. Reguera, D.R. Lovley, and B.A. Methé. 2008.
PilR, a transcriptional regulator for pilin and other genes required for Fe(III) reduction in Geobacter sulfurreducens.
J Mol Microbiol Biotechnol.
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Kashefi, K., B. M. Moskowitz, and D.R. Lovley. 2008.
Characterization of extracellular minerals produced during dissimilatory Fe(III) and U(VI) reduction at 100 ° by Pyrobaculum islandicum.
Geobiology 6:147–154.
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Kashefi, K., E.S. Shelobolina, W.C. Elliott, and D.R. Lovley. 2008.
Growth of thermophilic and hyperthermophilic Fe(III)-reducing microorganisms on a ferruginous smectite as the sole electron acceptor..
Appl Environ Microbiol 74(1):251-8.
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Esteve-Núñez, A., J. Sosnik, P. Visconti, and D.R. Lovley. 2008.
Fluorescent properties of c-type cytochromes reveal their potential role as an extracytoplasmic electron sink in Geobacter sulfurreducens.
Environ Microbiol. 10(2):497–505.
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Lanthier, M., K.B. Gregory, and D.R. Lovley. 2008.
Growth with high planktonic biomass in Shewanella oneidensis fuel cells.
FEMS Microbiol Lett 278(1):29-35.
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Holmes, D.E., R.A. O'Neil, H.A. Vrionis, L.A. N'Guessan, I. Ortiz-Bernad, M.J. Larrahondo, L.A. Adams, J.A. Ward, J.S. Nicoll, K.P. Nevin, M.A. Chavan, J.P. Johnson, P.E. Long, and D.R. Lovley. 2007.
Subsurface clade of Geobacteraceae that predominates in a diversity of Fe(III)-reducing subsurface environments.
ISME J 1(8):663-77.
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Ahrendt, A.J., S.L. Tollaksen, C. Lindberg, W. Zhu, J.R. Yates III, K.P. Nevin, G. Babnigg, D.R. Lovley, and C.S. Giometti. 2007.
Steady state protein levels in Geobacter metallireducens grown with iron (III) citrate or nitrate as terminal electron acceptor.
Proteomics 7(22):4148-57.
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Qian, X., G. Reguera, T. Mester, and D.R. Lovley. 2007.
Evidence that OmcB and OmpB of Geobacter sulfurreducens are outer membrane surface proteins.
FEMS Microbiology Letters 277(1):21-27.
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Coppi, M.V., R.A. O'Neil, C. Leang, F. Kaufmann, B.A. Methé, K.P. Nevin, T.L. Woodard, A. Liu, and D.R. Lovley. 2007.
Involvement of Geobacter sulfurreducens SfrAB in acetate oxidation rather than intracellular, respiration-linked Fe(III) citrate reduction.
Microbiology 153(Pt 10):3572-85.
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Yan, B., D.R. Lovley, and J. Krushkal. 2007.
Genome-wide similarity search for transcription factors and their binding sites in a metal-reducing prokaryote Geobacter sulfurreducens.
BioSystems 90(2):421–441.
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Richter, H., M. Lanthier, K.P. Nevin, and D.R. Lovley. 2007.
Lack of electricity production by Pelobacter carbinolicus indicates that the capacity for Fe(III) oxide reduction does not necessarily confer electron transfer ability to fuel cell anodes.
Appl Environ Microbiol 73(16):5347-53.
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Butler, J.E., Q. He, K.P. Nevin, Z. He, J. Zhou, and D.R. Lovley. 2007.
Genomic and microarray analysis of aromatics degradation in Geobacter metallireducens and comparison to a Geobacter isolate from a contaminated field site.
BMC Genomics 8
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Ueki, T., and D.R. Lovley. 2007.
Heat-shock sigma factor RpoH from Geobacter sulfurreducens.
Microbiology 153(Pt 3):838-46.
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Holmes, D.E., K.P. Nevin, T.L. Woodard, A.D. Peacock, and D.R. Lovley. 2007.
Prolixibacter bellariivorans gen. nov., sp. nov., a sugar-fermenting, psychrotolerant anaerobe of the phylum Bacteroidetes, isolated from a marine-sediment fuel cell.
Int J Syst Evol Microbiol 57(Pt 4):701-7.
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Nevin, K.P., D.E. Holmes, T.L. Woodard, S.F. Covalla, and D.R. Lovley. 2007.
Reclassification of Trichlorobacter thiogenes as Geobacter thiogenes comb. nov.
Int J Syst Evol Microbiol 57(Pt 3):463-6.
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Shelobolina, E.S., M.V. Coppi, A.A. Korenevsky, L.N. DiDonato, S.A. Sullivan, H. Konishi, H. Xu, C. Leang, J.E. Butler, B.C. Kim, and D.R. Lovley. 2007.
Importance of c-type cytochromes for U(VI) reduction by Geobacter sulfurreducens.
BMC Microbiol 7:16.
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Reguera, G., R.B. Pollina, J.S. Nicoll, and D.R. Lovley. 2007.
Possible nonconductive role of Geobacter sulfurreducens pilus nanowires in biofilm formation.
J Bacteriol 189(5):2125-7.
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Shelobolina, E.S., K.P. Nevin, J.D. Blakeney-Hayward, C.V. Johnsen, T.W. Plaia, P. Krader, T. Woodard, D.E. Holmes, C.G. Vanpraagh, and D.R. Lovley. 2007.
Geobacter pickeringii sp. nov., Geobacter argillaceus sp. nov. and Pelosinus fermentans gen. nov., sp. nov., isolated from subsurface kaolin lenses.
Int J Syst Evol Microbiol 57(Pt 1):126-35.
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Krushkal, J., B. Yan, L.N. DiDonato, M. Puljic, K.P. Nevin, T.L. Woodard, R.M. Adkins, B.A. Methé, and D.R. Lovley. 2007.
Genome-wide expression profiling in Geobacter sulfurreducens: identification of Fur and RpoS transcription regulatory sites in a relGsu mutant.
Funct Integr Genomics 7(3):229-55.
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Yan, B., C. Núñez, T. Ueki, A. Esteve-Núñez, M. Puljic, R.M. Adkins, B.A. Methé, D.R. Lovley, and J. Krushkal. 2006.
Computational prediction of RpoS and RpoD regulatory sites in Geobacter sulfurreducens using sequence and gene expression information.
Gene 384:73-95.
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Reguera, G., K.P. Nevin, J.S. Nicoll, S.F. Covalla, T.L. Woodard, and D.R. Lovley. 2006.
Biofilm and nanowire production leads to increased current in Geobacter sulfurreducens fuel cells.
Appl Environ Microbiol 72(11):7345-8.
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Haveman, S.A., D.E. Holmes, Y.H. Ding, J.E. Ward, R.J. DiDonato Jr, and D.R. Lovley. 2006.
c-type cytochromes in Pelobacter carbinolicus.
Appl Environ Microbiol 72(11):6980-6985.
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DiDonato, L.N., S.A. Sullivan, B.A. Methé, K.P. Nevin, R. England, and D.R. Lovley. 2006.
Role of RelGsu in stress response and Fe(III) reduction in Geobacter sulfurreducens.
J Bacteriol 188(24):8469-78.
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Holmes, D.E., S.K. Chaudhuri, K.P. Nevin, T. Mehta, B.A. Methé, A. Liu, J.E. Ward, T.L. Woodard, J. Webster, and D.R. Lovley. 2006.
Microarray and genetic analysis of electron transfer electrodes in Geobacter sulfurreducens.
Environmental Microbiology 8(10):1805-1815.
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Mehta, T., S.E. Childers, R. Glaven, D.R. Lovley, and T. Mester. 2006.
A putative multicopper protein secreted by an atypical type II secretion system involved in the reduction of insoluble electron acceptors in Geobacter sulfurreducens.
Microbiology 152(Pt 8):2257-64.
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Lovley, D.R. 2006.
Microbial energizers: Fuel cells that keep on going.
Microbe 1(7)
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Ding, Y.H., K.K. Hixson, C.S. Giometti, A. Stanley, A. Esteve-Núñez, T. Khare, S.L. Tollaksen, W. Zhu, J.N. Adkins, M.S. Lipton, R.D. Smith, T. Mester, and D.R. Lovley. 2006.
The proteome of dissimilatory metal-reducing microorganism Geobacter sulfurreducens under various growth conditions.
Biochim Biophys Acta 1764(7):1198-1206.
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Lovley, D.R. 2006.
Taming electricigens: How electricity-generating microbes can keep going, and going — faster.
The Scientist 7(20):46.
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Lovley, D.R. 2006.
Bug juice: Harvesting electricity with microorganisms.
Nature Reviews Microbiology 4(7):497-508.
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Lovley, D.R. 2006.
Microbial fuel cells: Novel microbial physiologies and engineering approaches.
Current Opinion in Biotechnology 17(3):327-332.
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Núñez, C., A. Esteve-Núñez, C. Giometti, S. Tollaksen, T. Khare, W. Lin, D.R. Lovley, and B.A. Methé. 2006.
DNA microarray and proteomic analyses of the RpoS regulon in Geobacter sulfurreducens.
J Bacteriol 188(8):2792-800.
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Kim, B.C., X. Qian, C. Leang, M.V. Coppi, and D.R. Lovley. 2006.
Two putative c-type multiheme cytochromes required for the expression of OmcB, an outer membrane protein essential for optimal Fe(III) reduction in Geobacter sulfurreducens.
J Bacteriol 188(8):3138-42.
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Lowy, D.A., L.M. Tender, J.G. Zeikus, D.H. Park, and D.R. Lovley. 2006.
Harvesting energy from the marine sediment-water interface II: Kinetic activity of anode materials.
Biosens Bioelectron 21(11):2058-63.
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Mahadevan, R., D.R. Bond, J.E. Butler, A. Esteve-Nuúñez, M.V. Coppi, B.O. Palsson, C.H. Schilling, and D.R. Lovley. 2006.
Characterization of metabolism in the Fe(III)-reducing organism Geobacter sulfurreducens by constraint-based modeling.
Appl Environ Microbiol 72(2):1558-68.
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Butler, J.E., R.H. Glaven, A. Esteve-Núñez, C. Núñez, E.S. Shelobolina, D.R. Bond, and D.R. Lovley. 2006.
Genetic characterization of a single bifunctional enzyme for fumarate reduction and succinate oxidation in Geobacter sulfurreducens and engineering of fumarate reduction in Geobacter metallireducens.
J Bacteriol 188(2):450-5.
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Khare, T., A. Esteve-Núñez, K.P. Nevin, W. Zhu, J.R. Yates, D. R. Lovley, and C.S. Giometti. 2005.
Differential protein expression in the metal-reducing bacterium Geobacter sulfurreducens strain PCA grown with fumarate or ferric citrate.
Proteomics 6(2):632-640.
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Mehta, T., M.V. Coppi, S.E. Childers, and D.R. Lovley. 2005.
Outer membrane c-type cytochromes required for Fe(III) and Mn(IV) oxide reduction in Geobacter sulfurreducens.
Appl Environ Microbiol 71(12):8634-8641.
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Chang, Y.J., P.E. Long, R. Geyer, A.D. Peacock, C.T. Resch, K. Sublette, S. Pfiffner, A. Smithgall, R.T. Anderson, H.A. Vrionis, J.R. Stephen, R. Dayvault, I. Ortiz-Bernad, D.R. Lovley, and D.C. White. 2005.
Microbial incorporation of C-labeled acetate at the field scale: detection of microbes responsible for reduction of U(VI).
Environ Sci Technol 39(23):9039-9048.
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Gregory, K.B., and D.R. Lovley 2005.
Remediation and recovery of uranium from contaminated subsurface environments with electrodes.
Environ Sci Technol 39(22):8943-7.
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Holmes, D.E., K.P. Nevin, R.A. O'Neil, J.E. Ward, L.A. Adams, T.L. Woodard, H.A. Vrionis, and D.R. Lovley. 2005.
Potential for quantifying expression of the Geobacteraceae citrate synthase gene to assess the activity of Geobacteraceae in the subsurface and on current-harvesting electrodes.
Appl Environ Microbiol 71(11):6870-7.
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Shelobolina, E.S., S.M. Pickering, and D.R. Lovley. 2005.
Fe-cycle bacteria from industrial clays mined in Georgia, USA.
Clays and Clay Minerals 6(53):580-6.
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Vrionis, H.A., R.T. Anderson, I. Ortiz-Bernad, K.R. O'Neill, C.T. Resch, A.D. Peacock, R. Dayvault, D.C. White, P.E. Long, and D.R. Lovley. 2005.
Microbiological and geochemical heterogeneity in an in situ uranium bioremediation field site.
Appl Environ Microbiol 71(10):6308-18.
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Lovley, D.R. 2005.
Crystal ball. In silico biology meets in situ phenomenology.
Environ Microbiol 7(4):478-9.
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Leang, C., L.A. Adams, K.J. Chin, K.P. Nevin, B.A. Methé, J. Webster, M.L. Sharma, and D.R. Lovley. 2005.
Adaptation to disruption of the electron transfer pathway for Fe(III) reduction in Geobacter sulfurreducens.
J Bacteriol Sep; 187 187(17):5918-26.
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Bond, D.R., T. Mester, C.L. Nesbø, A.V. Izquierdo-Lopez, F.L. Collart, and D.R. Lovley. 2005.
Characterization of citrate synthase from Geobacter sulfurreducens and evidence for a family of citrate synthases similar to those of eukaryotes throughout the Geobacteraceae.
Appl Environ Microbiol 71(7):3858-65.
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Nevin, K.P., D.E. Holmes, T.L. Woodard, E.S. Hinlein, D.W. Ostendorf, and D.R. Lovley. 2005.
Geobacter bemidjiensis sp. nov. and Geobacter psychrophilus sp. nov., two novel Fe(III)-reducing subsurface isolates.
Int J Syst Evol Microbiol 55(Pt 4):1667-74.
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Afkar, E., G. Reguera, M. Schiffer, and D.R. Lovley. 2005.
A novel Geobacteraceae-specific outer membrane protein J (OmpJ) is essential for electron transport to Fe (III) and Mn (IV) oxides in Geobacter sulfurreducens.
BMC Microbiol 5:41.
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Leang, C., and D.R. Lovley. 2005.
Regulation of two highly similar genes, omcB and omcC, in a 10 kb chromosomal duplication in Geobacter sulfurreducens.
Microbiology 151(Pt 6):1761-7.
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Kim, B.C., C. Leang, Y.H. Ding, R.H. Glaven, M.V. Coppi, and D.R. Lovley. 2005.
OmcF, a putative c-type monoheme outer membrane cytochrome required for the expression of other outer membrane cytochromes in Geobacter sulfurreducens.
J Bacteriol 187(13):4505-13.
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Reguera, G., K.D. McCarthy, T. Mehta, J.S. Nicoll, M.T. Tuominen, and D.R. Lovley. 2005.
Extracellular electron transfer via microbial nanowires.
Nature 435(7045):1098-1101.
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Methé, B.A., K. Webster, K.P. Nevin, J.E. Butler, and D.R. Lovley. 2005.
DNA microarray analysis of nitrogen fixation and Fe(III) reduction in Geobacter sulfurreducens.
Appl Environ Microbiol 71(5):2530-8.
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Bond, D.R., and D.R. Lovley. 2005.
Evidence for involvement of an electron shuttle in electricity generation by Geothrix fermentans.
Appl Environ Microbiol 71(4):2186-9.
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Coppi, M.V. 2005.
The hydrogenases of Geobacter sulfurreducens: A comparative genomic perspective.
Microbiology 151(Pt 4):1239-1254.
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Esteve-Núñez, A., M.M. Rothermich, M. Sharma, and D.R. Lovley. 2005.
Growth of Geobacter sulfurreducens under nutrient-limiting conditions in continuous culture.
Environ Microbiol 7(5):641-648.
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Vinogradov, E., A. Korenevsky, D.R. Lovley, and T.J. Beveridge. 2004.
The structure of the core region of the lipopolysaccharide from Geobacter sulfurreducens.
Carbohydr Res. 339(18):2901-4.
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Kashefi, K., D.E. Holmes, D.R. Lovley, and J.M. Tor. 2004.
Potential importance of dissimilatory Fe(III)-reducing microorganisms in hot sedimentary environments.
The Subseafloor Biosphere at Mid-Ocean Ridges, Geophysical Monograph Series(144)
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Lovley, D.R. 2004.
Potential role of dissimilatory iron reduction in the early evolution of microbial respiration.
In J. Seckbach (ed.), Origins, Evolution and Biodiversity of Microbial Life. Kluwer, Netherlands.
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Holmes, D.E., K.P. Nevin, and D.R. Lovley. 2004.
Comparison of 16S rRNA, nifD, recA, gyrB, rpoB and fusA genes within the family Geobacteraceae fam. nov.
Int J Syst Evol Microbiol 54(Pt 5):1591-9.
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Holmes, D.E., K.P. Nevin, and D.R. Lovley. 2004.
In situ expression of nifD in Geobacteraceae in subsurface sediments.
Appl Environ Microbiol 70(12):7251-9.
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Ortiz-Bernad, I., R.T. Anderson, H.A. Vrionis, and D.R. Lovley. 2004.
Resistance of solid-phase U(VI) to microbial reduction during in situ bioremediation of uranium-contaminated groundwater.
Appl Environ Microbiol 70(12):7558-60.
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Holmes, D.E., D.R. Bond, R.A. O'Neil, C.E. Reimers, L.R. Tender, and D.R. Lovley. 2004.
Microbial communities associated with electrodes harvesting electricity from a variety of aquatic sediments.
Microb Ecol 48(2):178-90.
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Kashefi, K. 2004.
Response to Cowan: The upper temperature for life - where do we draw the line?.
Trends Microbiol 12(2):58-60.
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Holmes, D.E., J.S. Nicoll, D.R. Bond, and D.R. Lovley. 2004.
Potential role of a novel psychrotolerant member of the family Geobacteraceae, Geopsychrobacter electrodiphilus gen. nov., sp. nov., in electricity production by a marine sediment fuel cell.
Appl Environ Microbiol 70(10):6023-30.
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Núñez, C., L. Adams, S. Childers, and D.R. Lovley. 2004.
The RpoS sigma factor in the dissimilatory Fe(III)-reducing bacterium Geobacter sulfurreducens.
J Bacteriol 186(16):5543-6.
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Lovley, D.R., D.E. Holmes, and K.P. Nevin. 2004.
Dissimilatory Fe(III) and Mn(IV) reduction.
Advances in Microbial Physiology 49
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Chin, K.J., A. Esteve-Núñez, C. Leang, and D.R. Lovley. 2004.
Direct correlation between rates of anaerobic respiration and levels of mRNA for key respiratory genes in Geobacter sulfurreducens.
Appl Environ Microbiol 70(9):5183-89.
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Yan, B., B.A. Methé, D.R. Lovley, and J. Krushkal. 2004.
Computational prediction of conserved operons and phylogenetic footprinting of transcription regulatory elements in the metal-reducing bacterial family Geobacteraceae.
J Theor Biol 230(1):133-44.
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Holmes, D.E., D.R. Bond, and D.R. Lovley. 2004.
Electron transfer by Desulfobulbus propionicus to Fe(III) and graphite electrodes.
Appl Environ Microbiol 70(2):1234-7.
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Esteve-Núñez, A., C. Núñez, and D.R. Lovley. 2004.
Preferential reduction of Fe(III) over fumarate by Geobacter sulfurreducens.
J Bacteriol 186(9):2897-2899.
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Shelobolina, E.S., R.T. Anderson, Y.N. Vodyanitskii, A.V. Sivtsov, R. Yuretich, and D.R. Lovley. 2004.
Importance of clay size minerals for Fe(III) respiration in a petroleum-contaminated aquifer.
Geobiology 2:67-76.
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Coppi, M.V., R.A. O'Neil, and D.R. Lovley. 2004.
Identification of an uptake hydrogenase required for hydrogen-dependent reduction of Fe(III) and other electron acceptors by Geobacter sulfurreducens.
J Bacteriol 186(10):3022-3028.
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Lin, W.C., M.V. Coppi, and D.R. Lovley. 2004.
Geobacter sulfurreducens can grow with oxygen as a terminal electron acceptor.
Appl Environ Microbioli 70(4):2525-8.
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Ortiz-Bernad, I., R.T. Anderson, H.A. Vrionis, and D.R. Lovley. 2004.
Vanadium respiration by Geobacter metallireducens: novel strategy for in situ removal of vanadium from groundwater.
Appl Environ Microbiol 70(5):3091-3095.
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Shelobolina, E.S., S.A. Sullivan, K.R. O’Neill, K.P. Nevin, and D.R. Lovley. 2004.
Isolation, characterization, and U(VI)-reducing potential of a facultatively anaerobic, acid-resistant bacterium from low-pH, nitrate- and U(VI)-contaminated subsurface sediment and description of Salmonella subterranea sp. nov.
Appl Environ Microbiol 70(5):2959-2965.
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Gregory, K.B., D.R. Bond, and D.R. Lovley. 2004.
Graphite electrodes as electron donors for anaerobic respiration.
Environ Microbiol 6(6):596-604.
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Butler, J.E., F. Kaufmann, M.V. Coppi, C. Núñez, and D.R. Lovley. 2004.
MacA, a diheme c-type cytochrome involved in Fe(III) reduction by Geobacter sulfurreducens.
J Bacteriol 186(12):4042-5.
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Shelobolina E.S., C.G. VanPraagh, and D.R. Lovley. 2003.
Use of ferric and ferrous iron containing minerals for respiration by Desulfitobacterium frappieri.
Geomicrobiology Journal 20:143-56.
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Zhang, C.L., Y. Li, Q. Ye, J. Fong, A.D. Peacock, E.L. Blunt, J. Fang, D.R. Lovley, and D.C. White. 2003.
Carbon isotope signatures of fatty acids in Geobacter metallireducens and Shewanella algae.
Chemical Geology 195:17-28.
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Lloyd, J.R., D.R. Lovley, and L.E. Macaskie. 2003.
Biotechnological application of metal-reducing microorganisms.
Adv Appl Microbiol 53:85-128.
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Lloyd, J.R., C. Leang, A.L. Hodges Myerson, M.V. Coppi, S. Ciufo, B. Methé, S.J. Sandler, and D.R. Lovley. 2003.
Biochemical and genetic characterization of PpcA, a periplasmic c-type cytochrome in Geobacter sulfurreducens.
Biochem J 369(Pt 1):153-161.
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Bond, D.R., and D.R. Lovley. 2003.
Electricity production by Geobacter sulfurreducens attached to electrodes.
Appl Environ Microbiol 69(3):1548-55.
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Leang, C., M.V. Coppi, and D.R. Lovley. 2003.
OmcB, a c-type polyheme cytochrome, involved in Fe(III) reduction in Geobacter sulfurreducens.
J Bacteriol 185(7):2096-2103.
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Kashefi, K., D.E. Holmes, J.A. Baross, and D.R. Lovley. 2003.
Thermophily in the Geobacteraceae: Geothermobacter ehrlichii gen. nov., sp. nov., a novel thermophilic member of the Geobacteraceae from the "Bag City" hydrothermal vent.
Appl Environ Microbiol 69(5):2985-93.
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Jara, M., C. Núñez, S. Campoy, A.R. Fernández de Henestrosa, D.R. Lovley, and J. Barbé. 2003.
Geobacter sulfurreducens has two autoregulated lexA genes whose products do not bind the recA promoter: differing responses of lexA and recA to DNA damage.
J Bacteriol 185(8):2493-2502.
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Nevin, K.P., K.T. Finneran, and D.R. Lovley. 2003.
Microorganisms associated with uranium bioremediation in a high-salinity subsurface sediment.
Appl Environ Microbiol 69(6):3672-5.
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Finneran, K.T., C.V. Johnsen, and D.R. Lovley. 2003.
Rhodoferax ferrireducens sp. nov., a psychrotolerant, facultatively anaerobic bacterium that oxidizes acetate with the reduction of Fe(III).
Int J Syst Evol Microbiol 53(Pt 3):669-73.
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Tor, J.M., J.P. Amend, and D.R. Lovley. 2003.
Metabolism of organic compounds in anaerobic, hydrothermal sulphate-reducing marine sediments.
Environ Microbiol 5(7):583-91.
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Kashefi, K., and D.R. Lovley. 2003.
Extending the upper temperature limit for life.
Science 301(5635):934.
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Anderson, R.T., H.A. Vrionis, I. Ortiz-Bernad, C.T. Resch, P.E. Long, R. Dayvault, K. Karp, S. Marutzky, D.R. Metzler, A. Peacock, D.C. White, M. Lowe, and D.R. Lovley. 2003.
Stimulating the in situ activity of Geobacter species to remove uranium from the groundwater of a uranium-contaminated aquifer.
Appl Environ Microbiol 69(10):5884-5891.
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Chaudhuri, S.K., and D.R. Lovley. 2003.
Electricity generation by direct oxidation of glucose in mediatorless microbial fuel cells.
Nature Biotechnology 21(10):1229-1232.
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Lovley, D.R. 2003.
Cleaning up with genomics: Applying molecular biology to bioremediation.
Nature Reviews|Microbiology 1(1):36-44.
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Methé, B.A., K.E. Nelson, J.A. Eisen, I.T. Paulsen, W. Nelson, J.F. Heidelberg, D. Wu, M. Wu, N. Ward, M.J. Beanan, R.J. Dodson, R. Madupu, L.M. Brinkac, S.C. Daugherty, R.T. DeBoy, A.S. Durkin, M. Gwinn, J.F. Kolonay, S.A. Sullivan, D.H. Haft, J. Selengut, T.M. Davidsen, N. Zafar, O. White, B. Tran, C. Romero, H.A. Forberger, J. Weidman, H. Khouri, T.V. Feldblyum, T.R. Utterback, S.E. Van Aken, D.R. Lovley, and C.M. Fraser. 2003.
Genome of Geobacter sulfurreducens: metal reduction in subsurface environments.
Science 302(5652):1967.
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Cummings, D.E., O.L. Snoeyenbos-West, D.T. Newby, A.M. Niggemyer, D.R. Lovley, L.A. Achenbach, and R.F. Rosenzweig. 2003.
Diversity of Geobacteraceae species inhabiting metal-polluted freshwater lake sediments ascertained by 16S rDNA analyses.
Microb Ecol 46(2):257-269.
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Shelobolina, E.S., K. O'Neill, K.T. Finneran, L.A. Hayes, and D.R. Lovley. 2003.
Potential for in situ bioremediation of a low-pH, high-nitrate uranium-contaminated groundwater.
Soil & Sediment Contamination 12:865-884.
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Lovley, D.R. 2002.
Dissimilatory metal reduction: From early life to bioremediation.
ASM News 68(5):231-7.
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Nevin, K.P., and D.R. Lovley. 2002.
Mechanisms for Fe(III) oxide reduction in sedimentary environments.
Geomicrobiol J 19:141-159.
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Finneran, K.T., R.T. Anderson, K.P. Nevin, and D.R. Lovley. 2002.
Potential for bioremediation of uranium-contaminated aquifers with microbial U(VI) reduction.
Soil and Sediment Contamination 11(3):339-57.
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Chapelle, F.H., K. O'Neill, P.M. Bradley, B.A. Methé, S.A. Ciufo, L.L. Knobel, and D.R. Lovley. 2002.
A hydrogen-based subsurface microbial community dominated by methanogens.
Nature 415(6869):312-5.
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Bond, D.R., D.E. Holmes, L.M. Tender, and D.R. Lovley. 2002.
Electrode-reducing microorganisms that harvest energy from marine sediments. .
Science 295(5554):483-5.
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Kashefi, K., D.E. Holmes, A.L. Reysenbach, and D.R. Lovley. 2002.
Use of Fe(III) as an electron acceptor to recover previously uncultured hyperthermophiles: isolation and characterization of Geothermobacterium ferrireducens gen. nov., sp. nov.
Appl Environ Microbiol 68(4):1735-42.
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Childers, S.E., S. Ciufo, and D.R. Lovley. 2002.
Geobacter metallireducens accesses insoluble Fe(III) oxide by chemotaxis.
Nature 416(6882):767-9.
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Bond, D.R., and D.R. Lovley. 2002.
Reduction of Fe(III) oxide by methanogens in the presence and absence of extracellular quinones.
Environ Microbiol 4(2):115-24.
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Nevin, K.P., and D.R. Lovley. 2002.
Mechanisms for accessing insoluble Fe(III) oxide during dissimilatory Fe(III) reduction by Geothrix fermentans.
Appl Environ Microbiol 68(5):2294-9.
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Holmes, D.E., K.T. Finneran, R.A. O'Neil, and D.R. Lovley. 2002.
Enrichment of members of the family Geobacteraceae associated with stimulation of dissimilatory metal reduction in uranium-contaminated aquifer sediments.
Appl Environ Microbiol 68(5):2300-6.
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Hayes, L.A., and D.R. Lovley. 2002.
Specific 16S rDNA sequences associated with naphthalene degradation under sulfate-reducing conditions in harbor sediments.
Microb Ecol 43(1):134-45.
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Kashefi, K., J.M. Tor, D.E. Holmes, C.V. Gaw Van Praagh, A.L. Reysenbach, and D.R. Lovley. 2002.
Geoglobus ahangari gen. nov., sp. nov., a novel hyperthermophilic archaeon capable of oxidizing organic acids and growing autotrophically on hydrogen with Fe(III) serving as the sole electron acceptor.
Int J Syst Evol Microbiol 52(Pt 3):719-28.
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Tender, L.M., C.E. Reimers, H.A. Stecher, D.E. Holmes, D.R. Bond, D.A. Lowy, K. Pilobello, S.J. Fertig, and D.R. Lovley. 2002.
Harnessing microbially generated power on the seafloor.
Nat Biotechnol 20(8):821-5.
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Chapelle, F.H., P.M. Bradley, D.R. Lovley, K. O'Neill, and J.E. Landmeyer. 2002.
Rapid evolution of redox processes in a petroleum hydrocarbon-contaminated aquifer.
Ground Water 40(4):353-60.
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Anderson, R.T., and D.R. Lovley. 2002.
Chapter 7: Microbial redox interactions with uranium: an environmental perspective.
Interactions of Microorganisms with Radionuclides. pp 205-223.
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Klapper, L., D.M. McKnight, J.R. Fulton, E.L. Blunt-Harris, K.P. Nevin, D.R. Lovley, and P.G. Hatcher. 2002.
Fulvic acid oxidation state detection using fluorescence spectroscopy.
Environ Sci Technol 36(14):3170-5.
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Finneran, K.T., M.E. Housewright, and D.R. Lovley. 2002.
Multiple influences of nitrate on uranium solubility during bioremediation of uranium-contaminated subsurface sediments.
Environ Microbiol 4(9):510-6.
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Finneran, K.T., H.M. Forbush, C.V. Gaw VanPraagh, and D.R. Lovley. 2002.
Desulfitobacterium metallireducens sp. nov., an anaerobic bacterium that couples growth to the reduction of metals and humic acids as well as chlorinated compounds.
Int J Syst Evol Microbiol 52(Pt 6):1929-35.
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Rothermich, M.M., L.A. Hayes, and D.R. Lovley. 2002.
Anaerobic, sulfate-dependent degradation of polycyclic aromatic hydrocarbons in petroleum-contaminated harbor sediment.
Environ Sci Technol 36(22):4811-7.
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Lloyd, J.R., J. Chesnes, S. Glasauer, D.J. Bunker, F.R. Livens, and D.R. Lovley. 2002.
Reduction of actinides and fission products by Fe(III)-reducing bacteria.
Geomicrobiol J 19:103-20.
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Lovley, D.R. 2002.
Analysis of the genetic potential and gene expression of microbial communities involved in the in situ bioremediation of uranium and harvesting electrical energy from organic matter.
OMICS 6(4):331-9.
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Zhang, C.L., J. Horita, D.R. Cole, J. Zhou, D.R. Lovley and T.J. Phelps. 2001.
Temperature-dependent oxygen and carbon isotope fractionations of biogenic siderite.
Geochimica et Cosmochimica Acta 14(65):2257-2271.
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Finneran, K.T., D.R. Lovley, and E. Moyer. 2001.
Anaerobic strategies for enhanced MTBE and TBA bioremediation.
Contaminated Soil, Sediment, & Water Spring:91-94.
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Lovley, D.R. 2001.
Chapter 7: Reduction of iron and humics in subsurface environments.
In Subsurface Microbiology and Biogeochemistry pp. 193-217.
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McKnight, D.M., D.T. Scott, D.C. Hrncir, and D.R. Lovley. 2001.
Chapter 18: Photochemical and microbial processes influencing iron-humic interactions in stream and lake sediments.
Humic Substances and Chemical Contaminants. pp 351-69.
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Tor, J.M., K. Kashefi, and D.R. Lovley. 2001.
Acetate oxidation coupled to Fe(III) reduction in hyperthermophilic microorganisms.
Appl Environ Microbiol 67(3):1363-5.
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Snoeyenbos-West, O., C.G. Van Praagh, and D.R. Lovley. 2001.
Trichlorobacter thiogenes should be renamed as a Geobacter species.
Appl Environ Microbiol 67(2):1020-2.
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Childers, S.E., and D.R. Lovley. 2001.
Differences in Fe(III) reduction in the hyperthermophilic archaeon, Pyrobaculum islandicum, versus mesophilic Fe(III)-reducing bacteria.
FEMS Microbiol Lett 195(2):253-8.
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Coates, J.D., V.K. Bhupathiraju, L.A. Achenbach, M.J. Mclnerney, and D.R. Lovley. 2001.
Geobacter hydrogenophilus, Geobacter chapellei and Geobacter grbiciae, three new, strictly anaerobic, dissimilatory Fe(III)-reducers.
Int J Syst Evol Microbiol 51(Pt 2):581-8.
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Anderson, R.T., F.H. Chapelle, and D.R. Lovley. 2001.
Comment on "Abiotic controls on H2 production from basalt--water reactions and implications for aquifer biogeochemistry".
Environ Sci Technol 35(7):1556-9.
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Finneran, K.T., and D.R. Lovley. 2001.
Anaerobic degradation of methyl tert-butyl ether (MTBE) and tert-butyl alcohol (TBA).
Environ Sci Technol 35(9):1785-90.
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Tor, J.M., and D.R. Lovley. 2001.
Anaerobic degradation of aromatic compounds coupled to Fe(III) reduction by Ferroglobus placidus.
Environ Microbiol 3(4):281-7.
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Stults, J.R., O. Snoeyenbos-West, B. Methé, D.R. Lovley, and D.P. Chandler. 2001.
Application of the 5' fluorogenic exonuclease assay (TaqMan) for quantitative ribosomal DNA and rRNA analysis in sediments.
Appl Environ Microbiol 67(6):2781-9.
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Lloyd, J.R., and D.R. Lovley. 2001.
Microbial detoxification of metals and radionuclides.
Curr Opin Biotechnol 12(3):248-53.
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Coppi, M.V., C. Leang, S.J. Sandler, and D.R. Lovley. 2001.
Development of a genetic system for Geobacter sulfurreducens.
Appl Environ Microbiol 67(7):3180-7.
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Kashefi, K., J.M. Tor, K.P. Nevin, and D.R. Lovley. 2001.
Reductive precipitation of gold by dissimilatory Fe(III)-reducing bacteria and archaea.
Appl Environ Microbiol 67(7):3275-9.
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Kaufmann, F., and D.R. Lovley. 2001.
Isolation and characterization of a soluble NADPH-dependent Fe(III) reductase from Geobacter sulfurreducens.
J Bacteriol 183(15):4468-76.
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Lovley, D.R. 2001.
Anaerobes to the rescue.
Science 293(5534):1444-6.
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Magnuson, T.S., N. Isoyama, A.L. Hodges-Myerson, G. Davidson, M.J. Maroney, G.G. Geesey, and D.R. Lovley. 2001.
Isolation, characterization and gene sequence analysis of a membrane-associated 89 kDa Fe(III)-reducing cytochrome c from Geobacter sulfurreducens.
Biochem J 359(Pt 1):147-52.
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